Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

BRD4 5 datasets

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap

ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 255 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 325 bp overlap

ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 162 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 207 bp overlap

CEBPB 1 dataset

ChIP K562 ENCFF584CTB 62 bp overlap

CEBPG 2 datasets

ChIP K562 ENCFF783ADE 97 bp overlap

ChIP K562 ENCFF956TPS 64 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 264 bp overlap

CTCF 1 dataset

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 319 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 305 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 348 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 216 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 104 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 323 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 347 bp overlap

ChIP DE DE-GATA4-2 396 bp overlap

ChIP foregut GSE117136.GATA4.foregut 312 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 79 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 396 bp overlap

ChIP DE DE-GATA6-2 396 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 360 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 343 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 396 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 374 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 396 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 284 bp overlap

ChIP foregut GSE117136.GATA6.foregut 311 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 263 bp overlap

KDM1A 5 datasets

ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 158 bp overlap

ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 184 bp overlap

ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 212 bp overlap

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 179 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 141 bp overlap

MAFG 2 datasets

ChIP K-562 ENCSR818DQV.MAFG.K-562 57 bp overlap

ChIP K562 ENCFF455EEO 74 bp overlap

MED26 1 dataset

ChIP HEK293T GSE121024.MED26.HEK293T 152 bp overlap

MGA::EVX1 1 dataset

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 132 bp overlap

Msgn1 1 dataset

Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap

NANOG 4 datasets

ChIP WA01 ENCSR000BMT.NANOG.WA01 151 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 209 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap

ChIP hESC GSE18292.NANOG.hESC 86 bp overlap

NKX2-3 1 dataset

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

NKX2-4 1 dataset

Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap

Nkx2-1 1 dataset

Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap

RARA 3 datasets

ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 304 bp overlap

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 396 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 396 bp overlap

RARA::RXRG 1 dataset

Motif DE_36h DE_36h-RARARXRG_MA1149.2 17 bp overlap

RXRA 2 datasets

ChIP H1 ENCFF570NHK 201 bp overlap

ChIP WA01 ENCSR000BJW.RXRA.WA01 197 bp overlap

SETDB1 1 dataset

ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 222 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 258 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 297 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 396 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 273 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 306 bp overlap

ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 192 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 301 bp overlap

SMARCC1 3 datasets

ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 396 bp overlap

ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 345 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 234 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 236 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 265 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 198 bp overlap

SOX21 1 dataset

Motif DE_36h DE_36h-SOX21_MA0866.1 15 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 68 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 200 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap

TBX2 1 dataset

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

TEAD1 1 dataset

ChIP CCLP1 GSE62272.TEAD1.CCLP1 396 bp overlap

TERF2 1 dataset

ChIP LCL GSE55053.TERF2.LCL 171 bp overlap

ZIC1 1 dataset

Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap

ZNF184 1 dataset

Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap

ZNF382 1 dataset

Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 232 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 211 bp overlap

ZNF580 1 dataset

ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 200 bp overlap

ZNF623 2 datasets

ChIP HEK293 ENCFF505YHP 212 bp overlap

ChIP HEK293 ENCSR022IZK.ZNF623.HEK293 253 bp overlap

ZNF85 1 dataset

Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Zic1::Zic2 1 dataset

Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap

Genome Browser