chr12 : 82,634,500 – 82,635,195
695 bp 44 TFs 0 linked genes
This 695 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:82,629,500 – 82,640,195
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 437 bp overlap
BCL3 1 dataset
ChIP HepG2 ENCFF641LQV 253 bp overlap
BRD2 6 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 188 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 207 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA_JQ1 183 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 338 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 71 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 346 bp overlap
BRD4 7 datasets
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 181 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 188 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 117 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 194 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 190 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 178 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 228 bp overlap
CTCF 4 datasets
ChIP MCF-7 ENCFF139NQI 172 bp overlap
ChIP MCF-7 ENCFF494VXA 119 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 177 bp overlap
ChIP endodermal cell ENCFF471YCZ 198 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 209 bp overlap
E2F1 3 datasets
ChIP MCF-7 ENCFF692OYJ 403 bp overlap
ChIP MCF-7 ENCFF692OYJ 203 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 409 bp overlap
EGR1 3 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 182 bp overlap
ChIP HepG2 ENCFF674RQO 276 bp overlap
ChIP HepG2 ENCFF674RQO 312 bp overlap
ELF1 6 datasets
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 179 bp overlap
ChIP HepG2 ENCFF367ZWV 421 bp overlap
ChIP HepG2 ENCFF838BCU 277 bp overlap
ChIP MCF-7 ENCFF305BNP 391 bp overlap
ChIP MCF-7 ENCFF366KVK 501 bp overlap
ChIP MCF-7 ENCFF687CWI 99 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 190 bp overlap
FOXA1 71 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 226 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 264 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 189 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 242 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 197 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 201 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 203 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 166 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 141 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 439 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 409 bp overlap
ChIP HepG2 ENCFF207NVJ 169 bp overlap
ChIP HepG2 ENCFF361KNY 155 bp overlap
ChIP HepG2 ENCFF740VZW 173 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 176 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 130 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 324 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 166 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 189 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 258 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 163 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 230 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 105 bp overlap
ChIP MCF-7 ENCFF465LTH 239 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 261 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 219 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 197 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 303 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 207 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 178 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 316 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 109 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 324 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 476 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 217 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 205 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 185 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 171 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 137 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 172 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 239 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 197 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 231 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 261 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 189 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 251 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 299 bp overlap
ChIP MCF-7_shCTRL GSE132432.FOXA1.MCF-7_shCTRL 322 bp overlap
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 413 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 269 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 190 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 422 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 309 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 481 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 249 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 209 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 134 bp overlap
ChIP T-47D_JC4742 GSE126004.FOXA1.T-47D_JC4742 189 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 197 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 192 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 182 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 151 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 165 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 152 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 226 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 123 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 341 bp overlap
ChIP liver ERP002306.FOXA1.liver 170 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 117 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 118 bp overlap
FOXA2 13 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 260 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 423 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 222 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 405 bp overlap
ChIP DE DE-FOXA2-1 450 bp overlap
ChIP DE DE-FOXA2-2 448 bp overlap
ChIP HepG2 ENCFF533COJ 149 bp overlap
ChIP HepG2 ENCFF570ABM 339 bp overlap
ChIP HepG2 ENCFF570ABM 116 bp overlap
ChIP HepG2 ENCFF894AYY 245 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 224 bp overlap
ChIP liver ENCFF877SFI 345 bp overlap
ChIP liver ENCFF888VJF 345 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 171 bp overlap
FOXK1 1 dataset
ChIP HepG2 ENCFF635XWY 405 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 166 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 279 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 152 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 163 bp overlap
KLF4 1 dataset
ChIP MCF-7 ENCFF948KTQ 544 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 147 bp overlap
MAX 2 datasets
ChIP A549 ENCFF310XGQ 98 bp overlap
ChIP HepG2 ENCFF507HCX 536 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 127 bp overlap
ChIP LoVo_PHASES GSE51290.MYC.LoVo_PHASES 180 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 177 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 172 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 156 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 463 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 493 bp overlap
POLR2A 4 datasets
ChIP MCF-7 ENCFF164XWP 357 bp overlap
ChIP Peyer's patch ENCFF767HVN 406 bp overlap
ChIP transverse colon ENCFF193UMS 459 bp overlap
ChIP transverse colon ENCFF610RWV 425 bp overlap
PRDM10 2 datasets
ChIP Hep-G2 ENCSR289PSX.PRDM10.Hep-G2 268 bp overlap
ChIP HepG2 ENCFF324FNA 349 bp overlap
RAD21 2 datasets
ChIP MCF-7 ENCFF694KOM 161 bp overlap
ChIP MCF-7 ENCFF724VCQ 131 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 474 bp overlap
SP5 2 datasets
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 143 bp overlap
ChIP HepG2 ENCFF931FHV 351 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCFF827PZY 337 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 145 bp overlap
XRCC5 1 dataset
ChIP HepG2 ENCFF680LVJ 419 bp overlap
YY1 2 datasets
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 137 bp overlap
ChIP liver ENCFF400MBC 491 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 624 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 500 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 175 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 405 bp overlap
ZNF501 1 dataset
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 214 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 337 bp overlap
ZNF761 1 dataset
ChIP HepG2 ENCFF761IOF 504 bp overlap
ZNF788P 1 dataset
ChIP HepG2 ENCFF689IBZ 433 bp overlap
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