chr12 : 71,201,220 71,201,573
353 bp 43 TFs 0 linked genes
This 353 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:71,196,220 – 71,206,573
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 6 datasets
ChIP LNCaP GSE110655.AR.LNCaP 150 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 291 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 185 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 73 bp overlap
ChIP prostate_DHT GSE61838.AR.prostate_DHT 268 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 216 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 142 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BIP.BCL11A.WA01 262 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 192 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 205 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 173 bp overlap
CTCF 1 dataset
ChIP GP5D GSE51234.CTCF.GP5D 134 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 183 bp overlap
ChIP hESC GSE17917.EP300.hESC 353 bp overlap
ESR1 4 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 216 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_4 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_4 170 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 181 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 255 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 353 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 353 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 243 bp overlap
FOXA1 5 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 122 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 151 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 241 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 152 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 194 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 353 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 220 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 299 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 353 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 353 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 337 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 281 bp overlap
JUND 1 dataset
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 162 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 171 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 251 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 207 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 306 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 196 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 353 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 231 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 179 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 327 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 353 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 324 bp overlap
ChIP hESC GSE18292.NANOG.hESC 285 bp overlap
NCOA1 1 dataset
ChIP LS180_125 GSE39277.NCOA1.LS180_125 141 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 245 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 163 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 353 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 325 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 353 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 229 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 353 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 325 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 199 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 118 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 119 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 304 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 161 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 268 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 238 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 89 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 224 bp overlap
SOX2 8 datasets
ChIP H9 GSE46837.SOX2.H9 261 bp overlap
ChIP LK2 GSE137459.SOX2.LK2 310 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 353 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 353 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 353 bp overlap
ChIP hESC GSE18292.SOX2.hESC 287 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 353 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 353 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 327 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 189 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 225 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 200 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 233 bp overlap
VDR 2 datasets
ChIP LNCaP GSE64656.VDR.LNCaP 243 bp overlap
ChIP LS180_125 GSE31939.VDR.LS180_125 310 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 353 bp overlap