chr12 : 64,633,276 64,633,501
225 bp 47 TFs 0 linked genes
This 225 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:64,628,276 – 64,638,501
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 225 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 55 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 114 bp overlap
BRD4 2 datasets
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 154 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 117 bp overlap
CHD4 1 dataset
ChIP A-549 ENCSR550SCU.CHD4.A-549 99 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 93 bp overlap
ESR1 1 dataset
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 51 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 67 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 225 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 225 bp overlap
ChIP DE DE-FOXA2-2 225 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 146 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 225 bp overlap
ChIP DE DE-GATA4-2 225 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 210 bp overlap
ChIP DE DE-GATA6-2 225 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 210 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 178 bp overlap
GFI1 2 datasets
ChIP HepG2 ENCFF472INF 67 bp overlap
ChIP HepG2 ENCFF472INF 225 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 225 bp overlap
KDM1A 1 dataset
ChIP A-549 ENCSR639GWS.KDM1A.A-549 225 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 95 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 74 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 68 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 225 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 71 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 103 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 225 bp overlap
RAD21 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 225 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 77 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 141 bp overlap
RUNX1 4 datasets
ChIP ME-1 GSE117138.RUNX1.ME-1 121 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 121 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 114 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 62 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 225 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 225 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 225 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 225 bp overlap
SPI1 3 datasets
ChIP HL-60 ENCFF645GBT 119 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 62 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 103 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 126 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 65 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 85 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 106 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 62 bp overlap
TCF7 1 dataset
ChIP HepG2 ENCFF628OFQ 225 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 192 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 174 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 115 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 111 bp overlap
ZNF274 5 datasets
ChIP GM08714 ENCFF609SEN 225 bp overlap
ChIP GM08714 ENCFF609SEN 172 bp overlap
ChIP GM08714 ENCSR000EUI.ZNF274.GM08714 225 bp overlap
ChIP HEK293 ENCFF742VRL 225 bp overlap
ChIP HEK293 ENCSR178QVJ.ZNF274.HEK293 225 bp overlap
ZNF319 1 dataset
ChIP K562 ENCFF561ZSB 218 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 139 bp overlap