chr12 : 19,263,740 19,263,963
223 bp 40 TFs 1 linked gene
This 223 bp open chromatin element is linked to PLEKHA5 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLEKHA5 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:19,258,740 – 19,268,963
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 223 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 223 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 209 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 223 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 103 bp overlap
ERG 5 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 169 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 154 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 167 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 166 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 152 bp overlap
FLI1 1 dataset
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 223 bp overlap
Foxq1 1 dataset
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GLIS3 2 datasets
Motif ES_0h ES_0h-GLIS3_MA0737.1 14 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 223 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 212 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 217 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 61 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 223 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 148 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 223 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 223 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 158 bp overlap
ChIP H1 ENCFF747ZPQ 223 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 223 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 223 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 215 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 223 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 223 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 223 bp overlap
ChIP hESC GSE18292.NANOG.hESC 191 bp overlap
NIPBL 1 dataset
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 194 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 223 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 223 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 223 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 212 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 108 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 154 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 128 bp overlap
RORB 1 dataset
Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 172 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 145 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 134 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 223 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 193 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 145 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 223 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 223 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 223 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 191 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 221 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 143 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 157 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 144 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 149 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 223 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 223 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 223 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 221 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 223 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 134 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 159 bp overlap
THRA 1 dataset
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 221 bp overlap
ZNF24 1 dataset
Motif ES_0h ES_0h-ZNF24_MA1124.1 13 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 223 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 178 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap