chr12 : 18,283,857 – 18,284,337

480 bp 54 TFs 0 linked genes

This 480 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

54 transcription factors

AR 2 datasets

ChIP LNCaP GSE80256.AR.LNCaP 299 bp overlap

ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 128 bp overlap

ARNT 1 dataset

ChIP A-549 GSE85352.ARNT.A-549 245 bp overlap

ASCL1 1 dataset

Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 3 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 130 bp overlap

ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 197 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 201 bp overlap

Bhlha15 1 dataset

Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 304 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 106 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ERG 1 dataset

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 187 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 110 bp overlap

FERD3L 1 dataset

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 137 bp overlap

HAND2 2 datasets

ChIP Kelly GSE94822.HAND2.Kelly 149 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 197 bp overlap

MYC 1 dataset

ChIP SK-N-AS GSE138295.MYC.SK-N-AS 238 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 256 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 188 bp overlap

MYF5 1 dataset

Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

NANOG 2 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 123 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

OSR2 1 dataset

Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PGR 2 datasets

ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 441 bp overlap

ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 55 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 251 bp overlap

POU5F1 1 dataset

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 480 bp overlap

PPARA::RXRA 1 dataset

Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap

REST 1 dataset

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

SIN3A 1 dataset

ChIP WA01 ENCSR000EBO.SIN3A.WA01 141 bp overlap

SNAI2 2 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 219 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 330 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 127 bp overlap

TFAP2A 2 datasets

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 2 datasets

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap

TFAP2C 4 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 480 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 84 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZNF16 1 dataset

Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap

ZNF189 1 dataset

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

ZNF708 1 dataset

Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap

ZNF750 1 dataset

ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 181 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap