chr11 : 119,874,722 119,875,052
330 bp 44 TFs 0 linked genes
This 330 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:119,869,722 – 119,880,052
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 149 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 193 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 233 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 209 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 282 bp overlap
BRD4 6 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 330 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 330 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 330 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 330 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 330 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 330 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 134 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR000BNE.EGR1.K-562 109 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 211 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 330 bp overlap
EZH2 5 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 279 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 261 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 226 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 330 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 232 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 244 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 240 bp overlap
ChIP DE DE-FOXA2-2 230 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 244 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 236 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 330 bp overlap
ChIP SK-N-SH ENCFF764OZD 215 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 213 bp overlap
GATA3 2 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 65 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 67 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-2 109 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 56 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 190 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 324 bp overlap
GATA6 6 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 217 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 153 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 144 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 187 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 243 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 330 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 78 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 330 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 85 bp overlap
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 132 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 113 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 67 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 168 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 236 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 215 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 75 bp overlap
MYCN 7 datasets
ChIP BE2C GSE80151.MYCN.BE2C 234 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 330 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 192 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 330 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 330 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 234 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 67 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 330 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 81 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 206 bp overlap
RAD21 3 datasets
ChIP SK-N-SH ENCFF747MAS 218 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 148 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 266 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 203 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 165 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 222 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 330 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 330 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 322 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 317 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 330 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 330 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 248 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 230 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 124 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 218 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 137 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 99 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 144 bp overlap
TFAP2B 2 datasets
ChIP SK-N-SH ENCFF869XXQ 115 bp overlap
ChIP SK-N-SH ENCFF869XXQ 182 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 251 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 330 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 330 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BKU.YY1.K-562 59 bp overlap