chr11 : 20,274,053 20,274,510
457 bp 51 TFs 0 linked genes
This 457 bp open chromatin element has no linked target genes and is bound by 51 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:20,269,053 – 20,279,510
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 204 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 457 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 271 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 142 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 68 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 367 bp overlap
BRD4 4 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 266 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 293 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 239 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 261 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 189 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 66 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 203 bp overlap
ChIP GM12878 ENCFF813OXE 134 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 340 bp overlap
ChIP LCL GSE75503.EBF1.LCL 238 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 287 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 183 bp overlap
EZH2 4 datasets
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 259 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 111 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 187 bp overlap
ChIP neural progenitor cell ENCFF472NFV 457 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 144 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 391 bp overlap
ChIP DE DE-GATA4-2 407 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 318 bp overlap
ChIP DE DE-GATA6-2 429 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 265 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 412 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 290 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 391 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 172 bp overlap
KMT2A 1 dataset
ChIP RS4-11 GSE38403.KMT2A.RS4-11 154 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 166 bp overlap
ChIP RH4 GSE83726.MED1.RH4 372 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 252 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 457 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCSR000BNG.MEF2C.GM12878 149 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 194 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 227 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 122 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 196 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 208 bp overlap
PKNOX1 1 dataset
ChIP HEK293T ENCFF174WDB 329 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 283 bp overlap
RELA 1 dataset
ChIP GM12891 ENCSR000EAI.RELA.GM12891 232 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 457 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 352 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 365 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 216 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 333 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 331 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 219 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 457 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 280 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 145 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 99 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 197 bp overlap
ZNF423 2 datasets
ChIP HEK293 ENCFF937QHI 315 bp overlap
ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 226 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 457 bp overlap
ZSCAN29 2 datasets
ChIP GM12878 ENCFF983OKU 285 bp overlap
ChIP GM12878 ENCSR412YGM.ZSCAN29.GM12878 263 bp overlap