Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

53 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 316 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

BRD4 1 dataset

ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 229 bp overlap

CTCF 3 datasets

ChIP HCT-116 GSE131606.CTCF.HCT-116 182 bp overlap

ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 326 bp overlap

ChIP thoracic aorta ENCFF012WJQ 325 bp overlap

DMRTA1 1 dataset

Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap

DMRTC2 1 dataset

Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap

EGR1 1 dataset

ChIP H1 ENCFF451BLH 261 bp overlap

EP300 1 dataset

ChIP gastroesophageal sphincter ENCFF211FPL 65 bp overlap

ESR1 2 datasets

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 209 bp overlap

ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 156 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 206 bp overlap

HDAC2 2 datasets

ChIP WA01 ENCSR000AVB.HDAC2.WA01 152 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 133 bp overlap

HIF1A 1 dataset

ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 99 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 272 bp overlap

JUN 5 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 231 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 277 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 326 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 326 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 326 bp overlap

JUND 1 dataset

ChIP WA01 ENCSR000BKP.JUND.WA01 137 bp overlap

KDM4C 1 dataset

ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 150 bp overlap

KLF1 1 dataset

Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap

KLF2 1 dataset

Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap

KLF3 1 dataset

Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap

KLF4 1 dataset

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

KLF5 1 dataset

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

KLF6 1 dataset

Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 61 bp overlap

MED1 2 datasets

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 199 bp overlap

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 326 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 264 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 326 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 201 bp overlap

Nrf1 1 dataset

Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 326 bp overlap

POLR2A 6 datasets

ChIP sigmoid colon ENCFF748YVT 149 bp overlap

ChIP spleen ENCFF446ZGT 122 bp overlap

ChIP stomach ENCFF607ZPU 123 bp overlap

ChIP suprapubic skin ENCFF832BBO 77 bp overlap

ChIP suprapubic skin ENCFF832BBO 306 bp overlap

ChIP transverse colon ENCFF610RWV 202 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 318 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 213 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 220 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 170 bp overlap

REST 1 dataset

ChIP GM23338 ENCFF024TCL 247 bp overlap

SMAD2 3 datasets

ChIP hESC GSE29422.SMAD2.hESC 301 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 326 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 282 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 326 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 326 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 326 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 326 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 326 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 326 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 326 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 286 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 253 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 312 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 309 bp overlap

SMAD4 1 dataset

ChIP hESC GSE29422.SMAD4.hESC 282 bp overlap

SMARCA4 3 datasets

ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 213 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 262 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 307 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 223 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 224 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 326 bp overlap

SMC1 1 dataset

ChIP DKO GSE131606.SMC1.DKO 53 bp overlap

SS18 1 dataset

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 285 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 222 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 170 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 162 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF449 4 datasets

Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap

ChIP HEK293 ENCFF764ZIC 321 bp overlap

ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 326 bp overlap

ChIP HEK293 GSE76494.ZNF449.HEK293 163 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 230 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 273 bp overlap

ZNF682 1 dataset

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap

Genome Browser