Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

ARID2 1 dataset

ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 393 bp overlap

BRD4 4 datasets

ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 121 bp overlap

ChIP RH4 GSE83726.BRD4.RH4 222 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 201 bp overlap

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 295 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 241 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 159 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 201 bp overlap

DPF2 3 datasets

ChIP BIN-67 GSE117734.DPF2.BIN-67 148 bp overlap

ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 424 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 396 bp overlap

ELF1 1 dataset

ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 352 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FLI1 5 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 373 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 343 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 258 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 355 bp overlap

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 463 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 299 bp overlap

GATA4 1 dataset

ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 102 bp overlap

HDAC2 1 dataset

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 223 bp overlap

IRF2 1 dataset

ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 275 bp overlap

KLF4 1 dataset

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 149 bp overlap

LHX2 1 dataset

ChIP retina_pigment GSE60024.LHX2.retina_pigment 240 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 173 bp overlap

MAFF 2 datasets

Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap

ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 118 bp overlap

MAFK 6 datasets

ChIP HeLa-S3 ENCFF304XGR 195 bp overlap

ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 99 bp overlap

ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 121 bp overlap

ChIP HepG2 ENCFF743ZOF 172 bp overlap

ChIP HepG2 ENCFF767LDG 179 bp overlap

ChIP IMR-90 ENCFF336DHZ 74 bp overlap

MRTFA 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 251 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 463 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 142 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 463 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 282 bp overlap

Mafb 1 dataset

Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 75 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 258 bp overlap

NRL 1 dataset

Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 176 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 463 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 395 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 463 bp overlap

SMARCA2 4 datasets

ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 463 bp overlap

ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 299 bp overlap

ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 62 bp overlap

ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 463 bp overlap

SMARCA4 6 datasets

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 463 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 102 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 265 bp overlap

ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 207 bp overlap

ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 463 bp overlap

ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 423 bp overlap

SMARCC1 6 datasets

ChIP BIN-67 GSE117734.SMARCC1.BIN-67 270 bp overlap

ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 402 bp overlap

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 290 bp overlap

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 459 bp overlap

ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 233 bp overlap

ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 340 bp overlap

STAT3 3 datasets

ChIP HCC1187 GSE152203.STAT3.HCC1187 167 bp overlap

ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 351 bp overlap

ChIP MDA-MB-453 GSE152203.STAT3.MDA-MB-453 315 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 193 bp overlap

ZNF157 1 dataset

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

Genome Browser