Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

49 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 62 bp overlap

BMI1 1 dataset

ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 240 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 283 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 283 bp overlap

ChIP neural cell ENCFF442QNK 279 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 283 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

Lhx3 1 dataset

Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap

MAX 2 datasets

ChIP H1 ENCFF914VQY 282 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 201 bp overlap

MEIS1 3 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MEIS2 1 dataset

Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap

MSANTD3 1 dataset

Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap

MXI1 1 dataset

ChIP neural cell ENCFF623HQN 283 bp overlap

MYB 2 datasets

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

MYF6 2 datasets

Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap

Motif ES_0h ES_0h-MYF6_MA0667.1 10 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 250 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 225 bp overlap

NFATC3 2 datasets

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap

NFATC4 2 datasets

Motif DE_12h DE_12h-NFATC4_MA1525.3 9 bp overlap

Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_12h DE_12h-NR1H4RXRA_MA1146.2 13 bp overlap

Nfatc1 2 datasets

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 2 datasets

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap

PKNOX2 2 datasets

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

Motif ES_0h ES_0h-PKNOX2_MA0783.1 12 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 283 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 224 bp overlap

RAD21 2 datasets

ChIP neural ENCSR198ZYJ.RAD21.neural 231 bp overlap

ChIP neural cell ENCFF564MOT 283 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 155 bp overlap

ChIP neural cell ENCFF882LXX 283 bp overlap

RFX1 8 datasets

Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap

Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap

ChIP K-562 ENCSR041AXL.RFX1.K-562 238 bp overlap

ChIP K-562 ENCSR968GIB.RFX1.K-562 239 bp overlap

ChIP K562 ENCFF421AVO 283 bp overlap

ChIP MCF-7 ENCFF973QAD 261 bp overlap

ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 283 bp overlap

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 283 bp overlap

RFX2 2 datasets

Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap

Motif ES_0h ES_0h-RFX2_MA0600.3 14 bp overlap

RFX3 2 datasets

Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap

Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap

RFX5 2 datasets

Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap

Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 283 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 283 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 253 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 170 bp overlap

SMC3 1 dataset

ChIP neural cell ENCFF795YGY 283 bp overlap

SNAI2 2 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 220 bp overlap

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 128 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 283 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 176 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 137 bp overlap

TGIF1 2 datasets

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

Motif ES_0h ES_0h-TGIF1_MA0796.1 12 bp overlap

TGIF2 2 datasets

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

Motif ES_0h ES_0h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 2 datasets

Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap

Motif ES_0h ES_0h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 2 datasets

Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap

Motif ES_0h ES_0h-TGIF2LY_MA1572.1 12 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

YY1 2 datasets

ChIP H1 ENCFF524BTL 271 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 256 bp overlap

ZIM3 2 datasets

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

Motif ES_0h ES_0h-ZIM3_MA1709.2 11 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF317 2 datasets

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 227 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 283 bp overlap

ZNF524 1 dataset

Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap

ZNF75D 1 dataset

Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap

Genome Browser