chr1 : 192,879,122 – 192,879,731
609 bp 40 TFs 0 linked genes
This 609 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:192,874,122 – 192,884,731
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 273 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 135 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 262 bp overlap
BCL11A 4 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 128 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 72 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 76 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 69 bp overlap
BRD2 4 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 176 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 176 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 188 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 155 bp overlap
CREB1 2 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 199 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 211 bp overlap
CTCF 90 datasets
ChIP BE2C ENCFF757SRF 229 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 179 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 235 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 326 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 124 bp overlap
ChIP Caco-2 ENCFF934QYS 126 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 112 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 103 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 159 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 165 bp overlap
ChIP GM23338 ENCFF772DML 165 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 71 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 197 bp overlap
ChIP HeLa-S3 ENCFF565UFR 136 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 202 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 110 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 109 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 264 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 226 bp overlap
ChIP HepG2 ENCFF194VBQ 180 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 227 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 169 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 149 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 136 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 127 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 97 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 215 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 181 bp overlap
ChIP K562 ENCFF082GOI 157 bp overlap
ChIP K562 ENCFF111MGE 187 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 121 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 157 bp overlap
ChIP Loucy ENCFF359TVQ 276 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 181 bp overlap
ChIP MDM_dNS1 GSE103477.CTCF.MDM_dNS1 156 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 229 bp overlap
ChIP OCI-LY1 ENCFF455ESK 255 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 180 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 181 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 141 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 191 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 129 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 207 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 213 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 121 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 143 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 329 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 154 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 156 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 202 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 205 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 182 bp overlap
ChIP adrenal gland ENCFF596QXB 253 bp overlap
ChIP adrenal gland ENCFF678WUB 211 bp overlap
ChIP adrenal gland ENCFF723HUU 299 bp overlap
ChIP adrenal gland ENCFF886WNR 135 bp overlap
ChIP adrenal-gland ENCSR770IWO.CTCF.adrenal-gland 243 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 220 bp overlap
ChIP adrenal-gland ENCSR899JSO.CTCF.adrenal-gland 190 bp overlap
ChIP endodermal cell ENCFF471YCZ 195 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 192 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 290 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 231 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 254 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 205 bp overlap
ChIP heart left ventricle ENCFF185CKY 213 bp overlap
ChIP heart left ventricle ENCFF244ZHV 270 bp overlap
ChIP heart left ventricle ENCFF548XHH 249 bp overlap
ChIP heart left ventricle ENCFF987PUT 267 bp overlap
ChIP heart right ventricle ENCFF027ORH 293 bp overlap
ChIP heart right ventricle ENCFF063GTP 307 bp overlap
ChIP heart right ventricle ENCFF435TKW 172 bp overlap
ChIP heart right ventricle ENCFF577TID 270 bp overlap
ChIP heart right ventricle ENCFF767XJQ 285 bp overlap
ChIP heart right ventricle ENCFF979TCT 307 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 208 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 207 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 147 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 164 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP islet ERP004003.CTCF.islet 172 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 142 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 280 bp overlap
ChIP myotube ENCFF981UHL 254 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 185 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 173 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 307 bp overlap
ChIP right atrium auricular region ENCFF696NTN 316 bp overlap
ChIP smooth muscle cell ENCFF656FBT 242 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 104 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 170 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 609 bp overlap
FOSL1 4 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 256 bp overlap
ChIP K-562 ENCSR000BMV.FOSL1.K-562 225 bp overlap
ChIP K562 ENCFF455MKD 416 bp overlap
ChIP K562 ENCFF728OTE 231 bp overlap
FOXA1 4 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 166 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 292 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 203 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 158 bp overlap
ChIP DE DE-FOXA2-1 283 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 212 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 142 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 228 bp overlap
ChIP DE DE-GATA4-1 298 bp overlap
ChIP DE DE-GATA4-2 381 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 213 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 257 bp overlap
ChIP foregut GSE117136.GATA4.foregut 257 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 288 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 247 bp overlap
ChIP DE DE-GATA6-2 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 248 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 138 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 240 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 270 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 485 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 225 bp overlap
ChIP K562 ENCFF388SEP 345 bp overlap
JUND 1 dataset
ChIP HCT116 ENCFF748ZQX 297 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 213 bp overlap
MED1 1 dataset
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 388 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 197 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 348 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 163 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 157 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 220 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 254 bp overlap
RAD21 23 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 112 bp overlap
ChIP GM12878 ENCFF101UQZ 183 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 132 bp overlap
ChIP H1 ENCFF698EWO 195 bp overlap
ChIP H1 ENCFF967OJF 195 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 159 bp overlap
ChIP HeLa-S3 ENCFF775CHI 207 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 193 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 171 bp overlap
ChIP K562 ENCFF169SQI 154 bp overlap
ChIP K562 ENCFF634XYR 252 bp overlap
ChIP MDM GSE103477.RAD21.MDM 233 bp overlap
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 236 bp overlap
ChIP MDM_H5N1 GSE103477.RAD21.MDM_H5N1 228 bp overlap
ChIP SK-N-SH ENCFF747MAS 207 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 153 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.RAD21.THP-1_PMA_Dex-6h 233 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 152 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 212 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-4h 162 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siNIPBL-eGFP-Pam3csk-4h 200 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.RAD21.THP-1_siWAPL-eGFP-Pam3csk-4h 243 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 280 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 238 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 242 bp overlap
REST 1 dataset
ChIP GM12878 ENCSR000BGF.REST.GM12878 94 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 205 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 101 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 226 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 57 bp overlap
SMC1 1 dataset
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 143 bp overlap
SMC3 2 datasets
ChIP HeLa-S3 ENCFF992MML 260 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 185 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 209 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 198 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 230 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 151 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 129 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 276 bp overlap
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