chr1 : 191,674,624 191,675,238
614 bp 86 TFs 0 linked genes
This 614 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:191,669,624 – 191,680,238
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP GSE110655.AR.LNCaP 113 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 133 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 251 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 386 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 614 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 614 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CUX2 1 dataset
Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
ESR1 17 datasets
ChIP MCF-7 GSE41561.ESR1.MCF-7 251 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 249 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 239 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 155 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 614 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 461 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 420 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 543 bp overlap
ChIP MCF-7_jc5854 GSE126004.ESR1.MCF-7_jc5854 363 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 443 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 537 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 171 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 614 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 282 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 224 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 226 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 189 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 509 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 212 bp overlap
FOXA1 23 datasets
ChIP MCF-7 GSE72249.FOXA1.MCF-7 507 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 208 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 184 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 533 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 542 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 227 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 286 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 225 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 302 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 255 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 154 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 306 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 261 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 271 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 238 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 614 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 66 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 408 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 406 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 210 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 265 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 290 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 435 bp overlap
ChIP DE DE-FOXA2-2 481 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 359 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE52725.GATA2.LNCaP 262 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 256 bp overlap
GATA3 8 datasets
ChIP Kelly GSE65664.GATA3.Kelly 194 bp overlap
ChIP MCF-7 ENCFF352QVM 362 bp overlap
ChIP MCF-7 ENCFF437NQS 366 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 533 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 486 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 267 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 163 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 237 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 399 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 181 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 400 bp overlap
ChIP DE DE-GATA4-2 614 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 441 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 614 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-2 614 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 349 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 413 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 439 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 482 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 327 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 309 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX6 1 dataset
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 197 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 429 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 308 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 614 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 444 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 460 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 222 bp overlap
NR2F2 3 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 184 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 333 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 169 bp overlap
NR3C1 3 datasets
ChIP MCF-7_DEX GSE72249.NR3C1.MCF-7_DEX 230 bp overlap
ChIP ZR751 GSE72249.NR3C1.ZR751 265 bp overlap
ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 415 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 158 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 142 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 445 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 410 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 370 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 565 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 205 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 570 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 353 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 173 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 173 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 265 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 379 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 500 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 381 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 455 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 272 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 614 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 223 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 369 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 433 bp overlap
SMARCB1 5 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 221 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 614 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 568 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 229 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 392 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 389 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 353 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
SOX18 1 dataset
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 338 bp overlap
STAT3 7 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 241 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 552 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 462 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 302 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 384 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 456 bp overlap
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 167 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TWIST1 1 dataset
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 151 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 344 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 123 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap