chr10 : 58,293,803 – 58,294,374

571 bp 77 TFs 0 linked genes

This 571 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

ATF4 1 dataset

Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap

Arid3b 2 datasets

Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap

Motif DE_36h DE_36h-Arid3b_MA0601.2 7 bp overlap

BARX1 1 dataset

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

BCL11A 1 dataset

Motif DE_12h DE_12h-BCL11A_MA2324.1 7 bp overlap

BSX 1 dataset

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

CEBPA 1 dataset

ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 139 bp overlap

CEBPG 1 dataset

Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap

DLX1 1 dataset

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

DUX4 3 datasets

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap

Dlx3 1 dataset

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

Dux 3 datasets

Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap

Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap

EOMES 2 datasets

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 292 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

FOS 1 dataset

Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap

FOSL1::JUND 1 dataset

Motif DE_36h DE_36h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 484 bp overlap

ChIP DE DE-FOXA2-2 380 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 477 bp overlap

ChIP DE DE-GATA4-2 464 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 468 bp overlap

ChIP DE DE-GATA6-2 439 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 447 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 490 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 571 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 435 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 440 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 383 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap

GBX2 1 dataset

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap

IKZF1 2 datasets

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap

Jun 1 dataset

Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap

LBX2 1 dataset

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

MEIS1 2 datasets

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap

MEIS2 2 datasets

Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap

Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap

MGA 1 dataset

Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap

MSX1 1 dataset

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap

Nobox 1 dataset

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

PBX2 2 datasets

Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap

Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

POLR2A 2 datasets

ChIP K562 ENCFF214YGX 228 bp overlap

ChIP K562 ENCFF215CWW 198 bp overlap

POU4F1 2 datasets

Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap

Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap

POU4F2 2 datasets

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap

POU4F3 2 datasets

Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap

Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 412 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 276 bp overlap

PPARG 1 dataset

Motif DE_36h DE_36h-PPARG_MA0066.2 19 bp overlap

PROP1 1 dataset

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

Pax7 1 dataset

Motif DE_36h DE_36h-Pax7_MA0680.3 10 bp overlap

RAX 1 dataset

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

RBM22 1 dataset

ChIP K-562 ENCSR848AOP.RBM22.K-562 52 bp overlap

RORB 1 dataset

Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap

RXRB 1 dataset

Motif DE_36h DE_36h-RXRB_MA1555.1 14 bp overlap

RXRG 1 dataset

Motif DE_36h DE_36h-RXRG_MA1556.1 14 bp overlap

SMAD2 2 datasets

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 187 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 426 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 475 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 392 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 541 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 503 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 468 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 464 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 552 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 163 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 232 bp overlap

SMARCA4 1 dataset

ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 351 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap

SPI1 1 dataset

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 232 bp overlap

SUPT5H 2 datasets

ChIP HeLa GSE125534.SUPT5H.HeLa 258 bp overlap

ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 73 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

TBX1 1 dataset

Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TBX5 1 dataset

Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 175 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZFP14 1 dataset

Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap

ZKSCAN1 1 dataset

Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap

ZNF418 2 datasets

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap

ZNF528 1 dataset

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

ZSCAN5C 1 dataset

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 131 bp overlap