chr10 : 55,426,187 55,426,612
425 bp 56 TFs 0 linked genes
This 425 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:55,421,187 – 55,431,612
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 152 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 425 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 374 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 3 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 333 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 374 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 120 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 286 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 304 bp overlap
EZH2 3 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 350 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 205 bp overlap
ChIP Pfeiffer GSE45982.EZH2.Pfeiffer 169 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 415 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 359 bp overlap
PAX1 1 dataset
Motif DE_12h DE_12h-PAX1_MA0779.2 16 bp overlap
PAX2 1 dataset
Motif DE_12h DE_12h-PAX2_MA0067.3 16 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 205 bp overlap
PAX6 2 datasets
Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 181 bp overlap
PAX8 1 dataset
Motif DE_12h DE_12h-PAX8_MA2094.1 16 bp overlap
PAX9 1 dataset
Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 156 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 339 bp overlap
RELB 1 dataset
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 273 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 198 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 199 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 211 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 324 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 275 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 307 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 422 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 273 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 118 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap