chr10 : 21,511,316 21,511,568
252 bp 43 TFs 1 linked gene
This 252 bp open chromatin element is linked to SKIDA1 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SKIDA1 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:21,506,316 – 21,516,568
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP L826 GSE83671.AFF1.L826 137 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 201 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 195 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 220 bp overlap
ASH2L 2 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 252 bp overlap
ChIP HepG2 ENCFF207QHL 252 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 79 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 153 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 97 bp overlap
BRD2 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD2.THP-1_DMSO-PMA 222 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 91 bp overlap
BRD4 3 datasets
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 107 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 202 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 242 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 252 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 252 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 200 bp overlap
EZH2 4 datasets
ChIP hepatocyte ENCFF118DKH 187 bp overlap
ChIP hepatocyte ENCFF118DKH 203 bp overlap
ChIP hepatocyte ENCFF552DZB 85 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 120 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 193 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 140 bp overlap
FOXA1 10 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 140 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 197 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 164 bp overlap
ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 252 bp overlap
ChIP HepG2 ENCFF207NVJ 82 bp overlap
ChIP HepG2 ENCFF740VZW 239 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 204 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 241 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 168 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 191 bp overlap
FOXA2 10 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 128 bp overlap
ChIP DE DE-FOXA2-1 252 bp overlap
ChIP DE DE-FOXA2-2 252 bp overlap
ChIP HepG2 ENCFF533COJ 139 bp overlap
ChIP HepG2 ENCFF570ABM 252 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 252 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 252 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 252 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 176 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 197 bp overlap
FOXP1 3 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 151 bp overlap
ChIP HepG2 ENCFF823ERM 252 bp overlap
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 200 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 250 bp overlap
ChIP DE DE-GATA4-1 252 bp overlap
ChIP DE DE-GATA4-2 252 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 196 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 252 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 252 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 252 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 252 bp overlap
ChIP foregut GSE117136.GATA6.foregut 233 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 236 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 57 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 162 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 99 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 151 bp overlap
MEN1 2 datasets
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 252 bp overlap
ChIP MOLM-13_compound10 GSE149183.MEN1.MOLM-13_compound10 252 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 204 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 200 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 191 bp overlap
NFIC 2 datasets
ChIP HepG2 ENCFF169TKU 252 bp overlap
ChIP HepG2 ENCFF169TKU 252 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 202 bp overlap
ChIP HepG2 ENCFF526NOJ 108 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 170 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 119 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 145 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 252 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 252 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 252 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 252 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 252 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 252 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 143 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 252 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 222 bp overlap
SMARCC1 5 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 252 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 252 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 173 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 184 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 252 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 211 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 65 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 252 bp overlap
YY1 1 dataset
ChIP liver ENCSR994YLZ.YY1.liver 171 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 66 bp overlap