chr1 : 182,662,222 – 182,662,446

224 bp 51 TFs 1 linked gene

This 224 bp open chromatin element is linked to RGS8 and is bound by 51 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
RGS8		9.8 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

AR 2 datasets

ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 157 bp overlap

ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 118 bp overlap

Atf3 1 dataset

Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap

BATF 1 dataset

Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 111 bp overlap

BNC2 1 dataset

Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap

BRD4 3 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 133 bp overlap

ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 224 bp overlap

ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 187 bp overlap

CTCF 4 datasets

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap

ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 79 bp overlap

ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 143 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF093OYK 224 bp overlap

ChIP BLaER1 ENCFF335XTP 224 bp overlap

DBP 2 datasets

Motif DE_12h DE_12h-DBP_MA0639.2 10 bp overlap

Motif ES_0h ES_0h-DBP_MA0639.2 10 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXA1 2 datasets

ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 116 bp overlap

ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 191 bp overlap

HLF 2 datasets

Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap

Motif ES_0h ES_0h-HLF_MA0043.4 9 bp overlap

JUN 1 dataset

ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 224 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 112 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIL3 2 datasets

Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap

Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

NFYA 1 dataset

Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap

NFYC 1 dataset

Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 144 bp overlap

POU1F1 2 datasets

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F1 2 datasets

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 125 bp overlap

POU5F1B 2 datasets

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 1 dataset

ChIP GM12878 ENCSR000BMY.RAD21.GM12878 97 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 152 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 74 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 126 bp overlap

TCF21 1 dataset

ChIP HCASMC GSE124011.TCF21.HCASMC 52 bp overlap

TEF 2 datasets

Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap

Motif ES_0h ES_0h-TEF_MA0843.2 10 bp overlap

XBP1 1 dataset

ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 224 bp overlap

YY1 2 datasets

ChIP NT2/D1 ENCFF999MII 201 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 132 bp overlap

ZBTB6 2 datasets

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap

ZFP42 2 datasets

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap