chr9 : 91,915,752 91,916,517
765 bp 72 TFs 0 linked genes
This 765 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:91,910,752 – 91,921,517
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
BARX1 1 dataset
Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap
CEBPA 7 datasets
Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 156 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 133 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 202 bp overlap
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 212 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 305 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 105 bp overlap
CEBPB 10 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 116 bp overlap
ChIP A549 ENCFF235AIY 257 bp overlap
Motif DE_24h DE_24h-CEBPB_MA0466.4 10 bp overlap
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 275 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 196 bp overlap
ChIP K562 ENCFF189VBN 271 bp overlap
ChIP K562 ENCFF584CTB 525 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 117 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 204 bp overlap
CEBPD 1 dataset
Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap
CEBPE 1 dataset
Motif DE_24h DE_24h-CEBPE_MA0837.3 10 bp overlap
CEBPG 2 datasets
Motif DE_24h DE_24h-CEBPG_MA0838.1 10 bp overlap
ChIP K562 ENCFF651CMK 401 bp overlap
Cebpa 9 datasets
ChIP BLaER1 ENCFF031ISE 408 bp overlap
ChIP BLaER1 ENCFF093OYK 447 bp overlap
ChIP BLaER1 ENCFF140EYR 437 bp overlap
ChIP BLaER1 ENCFF274GAT 453 bp overlap
ChIP BLaER1 ENCFF335XTP 265 bp overlap
ChIP BLaER1 ENCFF364PUR 710 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
ChIP BLaER1 ENCFF508JZF 441 bp overlap
ChIP BLaER1 ENCFF858JKM 457 bp overlap
DLX1 1 dataset
Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 201 bp overlap
Dlx2 1 dataset
Motif DE_24h DE_24h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_24h DE_24h-Dlx5_MA1476.3 8 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 338 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 561 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 252 bp overlap
EZH2 2 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 309 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 449 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 560 bp overlap
ChIP DE DE-FOXA2-2 420 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 543 bp overlap
ChIP DE DE-GATA4-2 662 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 659 bp overlap
ChIP DE DE-GATA6-2 685 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 765 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 748 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 707 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 539 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 752 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 759 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 464 bp overlap
GBX2 1 dataset
Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap
HLF 1 dataset
Motif DE_24h DE_24h-HLF_MA0043.4 9 bp overlap
HNF4A 1 dataset
Motif DE_24h DE_24h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_24h DE_24h-HNF4G_MA0484.3 9 bp overlap
HOXA7 1 dataset
Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap
HSF1 1 dataset
Motif DE_24h DE_24h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_24h DE_24h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_24h DE_24h-HSF4_MA0771.1 13 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 557 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 449 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 516 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 625 bp overlap
LBX2 1 dataset
Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 286 bp overlap
MGA 1 dataset
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MSX1 1 dataset
Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 575 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 317 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 294 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 151 bp overlap
NFATC3 2 datasets
ChIP K-562 ENCSR051OUX.NFATC3.K-562 157 bp overlap
ChIP K562 ENCFF078EKB 112 bp overlap
NFYA 1 dataset
ChIP K-562 ENCSR000EGR.NFYA.K-562 106 bp overlap
NFYB 5 datasets
ChIP K-562 ENCSR000EGQ.NFYB.K-562 209 bp overlap
ChIP K-562 GSE26439.NFYB.K-562 108 bp overlap
ChIP K562 ENCFF709RXX 112 bp overlap
ChIP WTC11 ENCFF751ZTQ 173 bp overlap
ChIP WTC11 ENCFF751ZTQ 384 bp overlap
NKX2-2 1 dataset
Motif DE_24h DE_24h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif DE_24h DE_24h-NKX2-5_MA0063.3 7 bp overlap
Nobox 1 dataset
Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
PHOX2A 1 dataset
Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 351 bp overlap
PROP1 1 dataset
Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap
RAX 1 dataset
Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 296 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 247 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 616 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 765 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 765 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 764 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 765 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 765 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 576 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 554 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 464 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 482 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 282 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 572 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 494 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 309 bp overlap
TBX1 1 dataset
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX4 1 dataset
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
Tfcp2l1 1 dataset
Motif DE_24h DE_24h-Tfcp2l1_MA0145.2 14 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 314 bp overlap
ChIP K562 ENCFF875HLX 192 bp overlap
ChIP K562 ENCFF875HLX 465 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 295 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 266 bp overlap
ZNF35 2 datasets
Motif DE_24h DE_24h-ZNF35_MA2333.1 7 bp overlap
Motif DE_24h DE_24h-ZNF35_MA2333.1 7 bp overlap