chr9 : 14,421,302 14,421,748
446 bp 45 TFs 0 linked genes
This 446 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:14,416,302 – 14,426,748
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 406 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 373 bp overlap
BRD4 2 datasets
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 340 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 243 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 69 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 377 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 214 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 345 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 329 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 281 bp overlap
ESRRG 1 dataset
ChIP SK-N-SH ENCFF394HLU 285 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 295 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 409 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 232 bp overlap
GATA3 7 datasets
ChIP BE2C GSE65664.GATA3.BE2C 335 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 260 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 323 bp overlap
ChIP SH-SY5Y ENCFF475HYF 411 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 365 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 200 bp overlap
ChIP SK-N-SH ENCFF040SSB 108 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 446 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 269 bp overlap
ChIP foregut GSE117136.GATA4.foregut 404 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 438 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 446 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 446 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 446 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 446 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 446 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 442 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 272 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 441 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 298 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 323 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 314 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 403 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 446 bp overlap
ChIP SK-N-SH ENCFF285GEQ 446 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 288 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 166 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 434 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 311 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 238 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 366 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 185 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 333 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 291 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 239 bp overlap
ChIP hESC GSE18292.NANOG.hESC 191 bp overlap
PATZ1 2 datasets
ChIP SK-N-SH ENCFF650NCN 365 bp overlap
ChIP SK-N-SH ENCFF650NCN 227 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 331 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 446 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 268 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 112 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 331 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 88 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 437 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 217 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 174 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 390 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 296 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 341 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 312 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 371 bp overlap
SMARCA4 3 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 446 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 336 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 426 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 306 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 342 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 446 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 200 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 230 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 236 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 100 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 204 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 292 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 196 bp overlap
TCF4 2 datasets
ChIP SK-N-SH ENCFF270OWF 325 bp overlap
ChIP SK-N-SH ENCFF270OWF 359 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 437 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 437 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 146 bp overlap
TSHZ2 3 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH ENCFF182EBB 218 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 327 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 394 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 312 bp overlap
ZNF287 1 dataset
ChIP HEK293T GSE78099.ZNF287.HEK293T 158 bp overlap