chr8 : 127,799,155 – 127,799,320
165 bp 49 TFs 1 linked gene
This 165 bp open chromatin element is linked to PVT1 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PVT1 4.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:127,794,155 – 127,804,320
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 165 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 149 bp overlap
BRD4 11 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 145 bp overlap
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 165 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 165 bp overlap
ChIP MCF-7_E2 GSE55921.BRD4.MCF-7_E2 165 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 102 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 165 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.BRD4.SUM159PT_300nMJQ1_24h 62 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 165 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 150 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 99 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 165 bp overlap
CEBPA 5 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 71 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 56 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 102 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 63 bp overlap
ChIP U-937 ERP008568.CEBPA.U-937 77 bp overlap
CEBPB 9 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 142 bp overlap
ChIP A549 ENCFF781RLJ 96 bp overlap
ChIP A549 ENCFF797MXZ 131 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 165 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 87 bp overlap
ChIP K562 ENCFF194QGF 87 bp overlap
ChIP monocyte GSE98367.CEBPB.monocyte 72 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 54 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 51 bp overlap
CEBPD 1 dataset
ChIP HAEC_IL1b_4h GSE89970.CEBPD.HAEC_IL1b_4h 73 bp overlap
CEBPG 3 datasets
ChIP K562 ENCFF956TPS 155 bp overlap
ChIP MCF-7 ENCFF155HZI 165 bp overlap
ChIP MCF-7 ENCSR094ZCF.CEBPG.MCF-7 53 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 165 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCFF969VBY 66 bp overlap
Cebpa 10 datasets
ChIP BLaER1 ENCFF031ISE 143 bp overlap
ChIP BLaER1 ENCFF093OYK 160 bp overlap
ChIP BLaER1 ENCFF234NTO 137 bp overlap
ChIP BLaER1 ENCFF250ODG 110 bp overlap
ChIP BLaER1 ENCFF274GAT 165 bp overlap
ChIP BLaER1 ENCFF346MCV 66 bp overlap
ChIP BLaER1 ENCFF364PUR 165 bp overlap
ChIP BLaER1 ENCFF374ODN 147 bp overlap
ChIP BLaER1 ENCFF798NMV 116 bp overlap
ChIP BLaER1 ENCFF858JKM 105 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 57 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 153 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 67 bp overlap
FOXA1 2 datasets
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 165 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 110 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 165 bp overlap
ChIP DE DE-FOXA2-2 165 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 165 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 165 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 78 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 97 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 156 bp overlap
GATA4 6 datasets
ChIP A-549 GSE85002.GATA4.A-549 59 bp overlap
ChIP DE DE-GATA4-1 165 bp overlap
ChIP DE DE-GATA4-2 165 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 100 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 136 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 64 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 165 bp overlap
ChIP DE DE-GATA6-2 165 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 165 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 165 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 165 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 77 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 165 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 165 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 165 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 165 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 165 bp overlap
MED1 3 datasets
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.MED1.SUM159PT_100nMtrametinib300nMJQ1_24h 120 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.MED1.SUM159PT_300nMJQ1_24h 165 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.MED1.SUM159PT_DMSO_24h 119 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 165 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 165 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 165 bp overlap
MYOD1 1 dataset
ChIP RD GSE137168.MYOD1.RD 93 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 165 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 52 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 95 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 165 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 165 bp overlap
POLR2A 1 dataset
ChIP GM12878 ENCFF412KAE 165 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 102 bp overlap
RELA 15 datasets
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 103 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 101 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 88 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 112 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 117 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 111 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 62 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 52 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 51 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 90 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 57 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 71 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 95 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 116 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 154 bp overlap
SIN3A 4 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 165 bp overlap
ChIP A549 ENCFF752ATT 165 bp overlap
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 153 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 118 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 165 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 165 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 165 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 165 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 89 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 149 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 165 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 165 bp overlap
TRIM24 1 dataset
ChIP K-562 ENCSR957LDM.TRIM24.K-562 87 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 114 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 114 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 165 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 165 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 98 bp overlap
ZMYND11 1 dataset
ChIP HeLa GSE51672.ZMYND11.HeLa 165 bp overlap
ZNF592 1 dataset
ChIP MCF-7 ENCSR701AQS.ZNF592.MCF-7 132 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 158 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 76 bp overlap
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