chr8 : 117,239,012 – 117,240,233
1,221 bp 63 TFs 0 linked genes
This 1.2 kb open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:117,234,012 – 117,245,233
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ARNTL 2 datasets
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 286 bp overlap
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 212 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 192 bp overlap
DMRT3 2 datasets
Motif DE_48h DE_48h-DMRT3_MA0610.2 7 bp overlap
Motif DE_60h DE_60h-DMRT3_MA0610.2 7 bp overlap
ELF1 2 datasets
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 242 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 173 bp overlap
ESRRA 6 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 604 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 585 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 564 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 350 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 328 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 351 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 623 bp overlap
FEZF2 2 datasets
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 111 bp overlap
GATA2 3 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 881 bp overlap
ChIP DE DE-GATA4-2 936 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 369 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 352 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 278 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 406 bp overlap
GATA5 3 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 19 datasets
ChIP DE DE-GATA6-1 750 bp overlap
ChIP DE DE-GATA6-2 954 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 265 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 749 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 254 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 368 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 580 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 750 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 272 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 494 bp overlap
ChIP foregut GSE117136.GATA6.foregut 365 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 355 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 241 bp overlap
Gata3 3 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 179 bp overlap
Ikzf3 2 datasets
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 135 bp overlap
MAFK 2 datasets
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MEIS1 2 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MYOD1 5 datasets
ChIP RD GSE137168.MYOD1.RD 229 bp overlap
ChIP RD GSE137168.MYOD1.RD 242 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 287 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 226 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 126 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NR1H2::RXRA 1 dataset
Motif DE_60h DE_60h-NR1H2RXRA_MA0115.1 17 bp overlap
NR2C1 2 datasets
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 3 datasets
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
NR2F1 3 datasets
Motif DE_48h DE_48h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 177 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 174 bp overlap
Nr1H2 2 datasets
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
PKNOX1 2 datasets
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
PPARD 1 dataset
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
Pparg::Rxra 1 dataset
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Prdm5 2 datasets
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RARA 1 dataset
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RXRB 1 dataset
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
Rarb 1 dataset
Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
Rxra 1 dataset
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 173 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 994 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 415 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 329 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 402 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 299 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 197 bp overlap
SNAI2 3 datasets
ChIP RD GSE137168.SNAI2.RD 220 bp overlap
ChIP RD GSE137168.SNAI2.RD 245 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 198 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 540 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 162 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 229 bp overlap
SPIB 1 dataset
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 195 bp overlap
TRPS1 3 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIM3 2 datasets
ChIP HEK293 GSE76494.ZIM3.HEK293 287 bp overlap
ChIP HEK293T GSE78099.ZIM3.HEK293T 330 bp overlap
ZNF135 2 datasets
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF184 3 datasets
ChIP K-562 ENCSR546IHU.ZNF184.K-562 284 bp overlap
ChIP K562 ENCFF579ZRD 377 bp overlap
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF530 1 dataset
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF768 2 datasets
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
ZNF770 2 datasets
Motif DE_48h DE_48h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
Zfp335 2 datasets
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap
Zic2 2 datasets
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
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