chr8 : 87,958,501 – 87,959,155
654 bp 40 TFs 0 linked genes
This 654 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:87,953,501 – 87,964,155
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 239 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 114 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 116 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 126 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 161 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 181 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 185 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 156 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 171 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 91 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 134 bp overlap
BRD3 1 dataset
ChIP MCF-7_E2 GSE109571.BRD3.MCF-7_E2 128 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 214 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 349 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 350 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 654 bp overlap
ERG 3 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 301 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 104 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 166 bp overlap
ESR1 6 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 230 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 241 bp overlap
ChIP T-47D ENCSR000BQD.ESR1.T-47D 200 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 126 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 284 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 410 bp overlap
ESR1_Y537S 1 dataset
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 273 bp overlap
ESRRA 1 dataset
ChIP MCF-7 ENCSR337NQP.ESRRA.MCF-7 256 bp overlap
FOXA1 6 datasets
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 128 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 233 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 187 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 141 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 247 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 265 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 223 bp overlap
ChIP DE DE-FOXA2-1 654 bp overlap
ChIP DE DE-FOXA2-2 610 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 492 bp overlap
GATA2 5 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 191 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 191 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 179 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 170 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 206 bp overlap
GATA3 15 datasets
ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 240 bp overlap
ChIP A1A3_Brg1KD_EtOH GSE112491.GATA3.A1A3_Brg1KD_EtOH 362 bp overlap
ChIP A1A3_Dex GSE112491.GATA3.A1A3_Dex 187 bp overlap
ChIP MCF-7 ENCFF352QVM 342 bp overlap
ChIP MCF-7 ENCFF437NQS 286 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 254 bp overlap
ChIP MCF-7_DMSO GSE29073.GATA3.MCF-7_DMSO 127 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 161 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 126 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 234 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 293 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 250 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 215 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 314 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 138 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 257 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 242 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 654 bp overlap
ChIP DE DE-GATA4-2 654 bp overlap
ChIP foregut GSE117136.GATA4.foregut 296 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 654 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 567 bp overlap
ChIP DE DE-GATA6-2 654 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 628 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 387 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 654 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 458 bp overlap
ChIP foregut GSE117136.GATA6.foregut 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 352 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 303 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 562 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 167 bp overlap
HDAC2 3 datasets
ChIP MCF-7 ENCFF881POI 267 bp overlap
ChIP MCF-7 ENCFF881POI 385 bp overlap
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 90 bp overlap
HSF1 2 datasets
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 193 bp overlap
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 121 bp overlap
JUN 1 dataset
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 282 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 269 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 290 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 153 bp overlap
NCOR2 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.NCOR2.B-cell_GERMINAL_CENTER 153 bp overlap
NR3C1 3 datasets
ChIP HeLa-B2_P65KD_DMSO GSE24518.NR3C1.HeLa-B2_P65KD_DMSO 111 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 169 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 282 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 114 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 418 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 359 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 309 bp overlap
PGR 2 datasets
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 186 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 126 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 168 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 281 bp overlap
SMARCA4 1 dataset
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 434 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 164 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 291 bp overlap
SPI1 1 dataset
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
STAT3 13 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 151 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 207 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 243 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 247 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 188 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 190 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 267 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 336 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 258 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 326 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 654 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 523 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 427 bp overlap
TEAD4 3 datasets
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 217 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 428 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 388 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 114 bp overlap
YY1AP1 2 datasets
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 160 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 226 bp overlap
ZNF449 1 dataset
ChIP HEK293 GSE76494.ZNF449.HEK293 151 bp overlap
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