chr1 : 165,907,309 165,907,582
273 bp 40 TFs 1 linked gene
This 273 bp open chromatin element is linked to ENSG00000236364 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000236364 6.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:165,902,309 – 165,912,582
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 131 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 212 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 207 bp overlap
CHD1 1 dataset
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 128 bp overlap
CTCF 2 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 174 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 58 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 143 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 52 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 50 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 172 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 118 bp overlap
FOS 1 dataset
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 189 bp overlap
FOSL2 5 datasets
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF548CXY 237 bp overlap
ChIP HepG2 ENCFF796NIA 185 bp overlap
ChIP SK-N-SH ENCFF127ZDW 247 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 118 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 239 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 157 bp overlap
GATA2 5 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 168 bp overlap
ChIP HepG2 ENCFF905PYM 273 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 174 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 269 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 231 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 210 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 273 bp overlap
ChIP DE DE-GATA4-2 273 bp overlap
ChIP foregut GSE117136.GATA4.foregut 273 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 273 bp overlap
ChIP DE DE-GATA6-2 273 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 218 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 273 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 145 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 139 bp overlap
ChIP HCT-116 GSE62890.HNF4A.HCT-116 238 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 210 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 229 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 273 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCFF551NEQ 156 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 108 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 145 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 208 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 273 bp overlap
RAD21 1 dataset
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 255 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 158 bp overlap
ChIP 786-O GSE109953.RELA.786-O 146 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 273 bp overlap
SMAD3 2 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 232 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 204 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 78 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 235 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 147 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 266 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 259 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 186 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 188 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 254 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 249 bp overlap