chr1 : 165,853,714 – 165,853,910
196 bp 59 TFs 0 linked genes
This 196 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:165,848,714 – 165,858,910
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 174 bp overlap
BRD4 3 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 194 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 196 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 73 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 80 bp overlap
CEBPB 7 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 189 bp overlap
ChIP IMR-90 ENCFF468UGY 196 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 196 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 195 bp overlap
ChIP K562 ENCFF189VBN 196 bp overlap
ChIP K562 ENCFF194QGF 81 bp overlap
ChIP K562 ENCFF584CTB 196 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 124 bp overlap
CEBPG 1 dataset
ChIP K-562 ENCSR490LWA.CEBPG.K-562 194 bp overlap
ELF3 2 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 83 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 100 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 150 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 98 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 195 bp overlap
ChIP DE DE-FOXA2-2 191 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 155 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 148 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 163 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 196 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 127 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 195 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 186 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 196 bp overlap
ChIP DE DE-GATA4-1 196 bp overlap
ChIP DE DE-GATA4-2 196 bp overlap
ChIP G296S GSE85628.GATA4.G296S 196 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 196 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 196 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 196 bp overlap
ChIP foregut GSE117136.GATA4.foregut 196 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 196 bp overlap
ChIP DE DE-GATA6-2 196 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 196 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 196 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 196 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 196 bp overlap
ChIP foregut GSE117136.GATA6.foregut 196 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 196 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 196 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 196 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 196 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 170 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 193 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 92 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 163 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 85 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 189 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 196 bp overlap
MEN1 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.MEN1.OCI-AML-3_DMSO 143 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 196 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 196 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 196 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 196 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 183 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 155 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 101 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 196 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 194 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 196 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 155 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 196 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 114 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 150 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 136 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 170 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 196 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 172 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 196 bp overlap
ChIP K562 ENCFF628RBP 137 bp overlap
SMARCA4 4 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 110 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 196 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 113 bp overlap
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 174 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 159 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 176 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 196 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 108 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 108 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 196 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 196 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 196 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 61 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 153 bp overlap
TCF7L2 1 dataset
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 55 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 102 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 165 bp overlap
ZBTB48 1 dataset
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 196 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 143 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 109 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 196 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 68 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 79 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCFF436CGE 181 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 158 bp overlap
ZNF394 1 dataset
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 196 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 196 bp overlap
ZNF843 1 dataset
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 142 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 119 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 188 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 196 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 193 bp overlap
Huangfu Lab · Publications · Resources · Contact