chr8 : 54,462,393 – 54,463,174
781 bp 38 TFs 2 linked genes
This 781 bp open chromatin element is linked to ENSG00000274310 and SOX17 and is bound by 38 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000274310 4.0 kb Proximal Proximity
SOX17 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:54,457,393 – 54,468,174
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
AR 28 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 110 bp overlap
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 317 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 149 bp overlap
ChIP VCaP GSE32892.AR.VCaP 269 bp overlap
ChIP VCaP GSE148358.AR.VCaP 308 bp overlap
ChIP VCaP GSE83650.AR.VCaP 252 bp overlap
ChIP VCaP GSE98809.AR.VCaP 252 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 274 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 425 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 538 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 562 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 554 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 437 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 260 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 313 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 290 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 230 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 274 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 239 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 256 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 342 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 199 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 307 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 296 bp overlap
ChIP VCaP_shCt GSE110655.AR.VCaP_shCt 386 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 427 bp overlap
ChIP VCaP_siBCOR-EtOH GSE122572.AR.VCaP_siBCOR-EtOH 334 bp overlap
ChIP VCaP_siNON-EtOH GSE122572.AR.VCaP_siNON-EtOH 335 bp overlap
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 493 bp overlap
ATF2 5 datasets
ChIP HEK293 ENCFF194VKZ 239 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 365 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 367 bp overlap
ChIP HepG2 ENCFF955VER 248 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 232 bp overlap
ATF7 4 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 308 bp overlap
ChIP HepG2 ENCFF470FKK 381 bp overlap
ChIP MCF-7 ENCFF578WKB 411 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 351 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 437 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 425 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 258 bp overlap
CREB1 9 datasets
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 213 bp overlap
ChIP HepG2 ENCFF792THT 391 bp overlap
ChIP Ishikawa ENCSR000BUR.CREB1.Ishikawa 157 bp overlap
ChIP MCF-7 ENCFF341ZEM 417 bp overlap
ChIP MCF-7 ENCFF867SAS 192 bp overlap
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 380 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 326 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 166 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 494 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 191 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 156 bp overlap
ERG 9 datasets
ChIP VCaP GSE83650.ERG.VCaP 403 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 403 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 210 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 218 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 307 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 224 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 138 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 549 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 429 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 207 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 215 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 207 bp overlap
EZH2 13 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 390 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 309 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 70 bp overlap
ChIP GM23338 ENCFF613YON 160 bp overlap
ChIP H1 ENCFF232NZA 781 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 530 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 189 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 502 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 211 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 295 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 457 bp overlap
ChIP neural progenitor cell ENCFF018MKA 174 bp overlap
ChIP neural progenitor cell ENCFF472NFV 753 bp overlap
EZH2_phosphoT487 3 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 314 bp overlap
ChIP Loucy ENCSR783QUL.EZH2_phosphoT487.Loucy 203 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 122 bp overlap
FOXA1 1 dataset
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 349 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 196 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP DE DE-FOXA2-2 231 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 177 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 220 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 178 bp overlap
GATA2 3 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 133 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 292 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 328 bp overlap
GATA4 5 datasets
ChIP A-549 GSE85002.GATA4.A-549 299 bp overlap
ChIP DE DE-GATA4-1 320 bp overlap
ChIP DE DE-GATA4-2 374 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 593 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 232 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 293 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 189 bp overlap
ChIP DE DE-GATA6-1 176 bp overlap
ChIP DE DE-GATA6-2 382 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 282 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 412 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 289 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 363 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 493 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 333 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 165 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 230 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 170 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 78 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 337 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 339 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 243 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 131 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
KMT2C 2 datasets
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 481 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 333 bp overlap
KMT2D 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 238 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4-T910M 781 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 488 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 221 bp overlap
NR3C1 6 datasets
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 122 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.NR3C1.Ishikawa_Dex_E2 110 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 105 bp overlap
ChIP NALM-6 GSE67046.NR3C1.NALM-6 221 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 84 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 375 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 337 bp overlap
POLR2A 2 datasets
ChIP endothelial cell of umbilical vein ENCFF091YHT 405 bp overlap
ChIP endothelial cell of umbilical vein ENCFF131DWO 201 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 208 bp overlap
RNF2 3 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 771 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 373 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 162 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 781 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 781 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 259 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 303 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 228 bp overlap
ChIP H1 ENCFF881NFR 162 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 277 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 172 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
ZBTB21 2 datasets
ChIP HEK293 ENCFF509WYZ 193 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 337 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 335 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 390 bp overlap
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