chr8 : 51,528,438 – 51,528,905

467 bp 59 TFs 0 linked genes

This 467 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

59 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 287 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 225 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 277 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 360 bp overlap

CTCFL 1 dataset

Motif DE_60h DE_60h-CTCFL_MA1102.3 8 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF093OYK 255 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DMRTA1 1 dataset

Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap

DMRTA2 1 dataset

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

DPRX 1 dataset

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

DUX4 2 datasets

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 289 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 155 bp overlap

ESR1 1 dataset

ChIP MCF-7_TAMR_E2 GSE86538.ESR1.MCF-7_TAMR_E2 113 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 290 bp overlap

ChIP DE DE-FOXA2-2 267 bp overlap

GATA1::TAL1 1 dataset

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 195 bp overlap

ChIP DE DE-GATA4-1 454 bp overlap

ChIP DE DE-GATA4-2 432 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 280 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 387 bp overlap

ChIP DE DE-GATA6-2 372 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 318 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 364 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 267 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 359 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 399 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 316 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 367 bp overlap

ChIP foregut GSE117136.GATA6.foregut 261 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

HMGA1 1 dataset

ChIP IMR-90_RAS-induced GSE111841.HMGA1.IMR-90_RAS-induced 118 bp overlap

Irf1 1 dataset

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

MED1 1 dataset

ChIP RH4 GSE83726.MED1.RH4 166 bp overlap

MED12 1 dataset

ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 148 bp overlap

MEF2D 1 dataset

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 221 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MGA 1 dataset

Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 167 bp overlap

NEUROD1 4 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 317 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 319 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 235 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 286 bp overlap

NFATC3 1 dataset

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

Nfat5 1 dataset

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 1 dataset

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 307 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap

POU3F1 1 dataset

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU5F1 1 dataset

Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap

PRDM9 1 dataset

Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD21 1 dataset

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 335 bp overlap

REST 1 dataset

ChIP hippocampus GSE144226.REST.hippocampus 238 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 258 bp overlap

SIX1 1 dataset

Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 364 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 304 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap

SREBF1 1 dataset

Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap

Six4 1 dataset

Motif DE_60h DE_60h-Six4_MA2001.2 7 bp overlap

Spi1 1 dataset

Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap

TEAD1 1 dataset

Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap

ZNF184 1 dataset

Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap

ZNF320 1 dataset

Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap

ZNF354A 1 dataset

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF416 1 dataset

Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap

ZNF784 1 dataset

Motif DE_60h DE_60h-ZNF784_MA1717.2 8 bp overlap