chr8 : 30,011,371 30,011,980
609 bp 36 TFs 5 linked genes
This 609 bp open chromatin element is linked to 5 target genes and is bound by 36 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
SARAF 71.3 kb Distal Multiome
LEPROTL1 83.6 kb Distal Multiome
DCTN6 144.6 kb Distal Multiome
DCTN6-DT 144.8 kb Distal Multiome
DUSP4 661.1 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:30,006,371 – 30,016,980
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 399 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 204 bp overlap
CTCF 27 datasets
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCFF757SRF 274 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 93 bp overlap
ChIP HepG2 ENCFF757EKU 351 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 282 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 163 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 137 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 293 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 217 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 478 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 200 bp overlap
ChIP SK-N-SH ENCFF731NJX 251 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 120 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 122 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 168 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 159 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 202 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 211 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 187 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 411 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 141 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 464 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 193 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 319 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 363 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 298 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 203 bp overlap
ESR1 1 dataset
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 184 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP DE DE-FOXA2-2 264 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE122847.GATA3.MCF-7 130 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 447 bp overlap
ChIP DE DE-GATA4-2 600 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 502 bp overlap
ChIP DE DE-GATA6-2 597 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 576 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 478 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 230 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 609 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 544 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 532 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 537 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 267 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 140 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 67 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 487 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 348 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 173 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 336 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 283 bp overlap
NR2F2 5 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 77 bp overlap
ChIP liver ENCFF427MRU 224 bp overlap
ChIP liver ENCFF565JGD 313 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 215 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 150 bp overlap
RAD21 16 datasets
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 137 bp overlap
ChIP HCT116 ENCFF568PEO 311 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 114 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 158 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 179 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 194 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 248 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 274 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 175 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 195 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 193 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 206 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 176 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 572 bp overlap
ChIP neural cell ENCFF564MOT 199 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 305 bp overlap
ChIP neural cell ENCFF882LXX 368 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 254 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 143 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 599 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 364 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 533 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 394 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 509 bp overlap
ChIP neural cell ENCFF795YGY 531 bp overlap
ChIP neural cell ENCFF795YGY 403 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 325 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 357 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 146 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 609 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 417 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 304 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 112 bp overlap