chr8 : 6,050,037 – 6,050,803
766 bp 63 TFs 0 linked genes
This 766 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:6,045,037 – 6,055,803
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 95 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 167 bp overlap
Bcl11B 2 datasets
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_24h DE_24h-Bcl11B_MA1989.2 9 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 131 bp overlap
ChIP BLaER1 ENCFF460KDD 176 bp overlap
EOMES 4 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 516 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 415 bp overlap
ChIP neural cell ENCFF442QNK 160 bp overlap
ERF::FOXO1 1 dataset
Motif DE_24h DE_24h-ERFFOXO1_MA1936.2 12 bp overlap
Elf5 1 dataset
Motif DE_24h DE_24h-Elf5_MA0136.4 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 462 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 466 bp overlap
ChIP DE DE-GATA6-2 420 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 473 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 431 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 425 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 611 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 542 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 337 bp overlap
HOXA4 2 datasets
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
Motif DE_24h DE_24h-HOXA4_MA1496.2 7 bp overlap
HOXB4 2 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap
HOXC4 2 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap
HOXD4 2 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MGA 3 datasets
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 364 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 429 bp overlap
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
Motif DE_24h DE_24h-MITF_MA0620.4 10 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 267 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 95 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 166 bp overlap
NKX6-1 2 datasets
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_24h DE_24h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_24h DE_24h-NKX6-3_MA1530.2 8 bp overlap
NR1D1 2 datasets
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
Motif DE_24h DE_24h-NR1D1_MA1531.2 14 bp overlap
NR1D2 2 datasets
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
Motif DE_24h DE_24h-NR1D2_MA1532.2 15 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 295 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 150 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 352 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 154 bp overlap
POU6F1 2 datasets
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
Motif DE_24h DE_24h-POU6F1_MA1549.2 7 bp overlap
PPARA::RXRA 2 datasets
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_24h DE_24h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 2 datasets
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Motif DE_24h DE_24h-PPARD_MA1550.2 14 bp overlap
Pparg::Rxra 2 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_24h DE_24h-PpargRxra_MA0065.3 13 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
RARA 4 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
Motif DE_24h DE_24h-RARA_MA0730.1 17 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 277 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 615 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 388 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 339 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 203 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 128 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 400 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 377 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 214 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_24h DE_24h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 363 bp overlap
SOX2 2 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 210 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 203 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap
SREBF2 3 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
Motif DE_24h DE_24h-SREBF2_MA0828.3 10 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 196 bp overlap
TBR1 3 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX18 3 datasets
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 3 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 3 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 3 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
TFE3 2 datasets
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
Motif DE_24h DE_24h-TFE3_MA0831.3 10 bp overlap
TFEB 2 datasets
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
Motif DE_24h DE_24h-TFEB_MA0692.2 8 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 397 bp overlap
Tbx6 3 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
USF1 3 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 204 bp overlap
USF2 2 datasets
Motif DE_12h DE_12h-USF2_MA0526.5 10 bp overlap
Motif DE_24h DE_24h-USF2_MA0526.5 10 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF652 2 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Motif DE_24h DE_24h-ZNF652_MA1657.2 9 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_24h DE_24h-ZSCAN31_MA1722.2 18 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
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