chr7 : 109,956,650 – 109,957,506
856 bp 48 TFs 0 linked genes
This 856 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:109,951,650 – 109,962,506
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
BHLHE22 5 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
Bhlha15 5 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_36h DE_36h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_48h DE_48h-Bhlha15_MA1472.3 8 bp overlap
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CEBPB 1 dataset
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 281 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 266 bp overlap
EP300 3 datasets
ChIP Ishikawa ENCFF364ZWT 418 bp overlap
ChIP Ishikawa ENCFF364ZWT 423 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 686 bp overlap
ESR1 27 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 557 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 466 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 431 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 281 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 842 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 719 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 409 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 853 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 302 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 583 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 196 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 246 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 623 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 748 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 699 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 189 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 429 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 361 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 475 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 474 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 430 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 798 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 624 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 856 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 580 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 220 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 328 bp overlap
FOXA1 1 dataset
ChIP Ishikawa ENCSR000BKW.FOXA1.Ishikawa 126 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 410 bp overlap
ChIP DE DE-FOXA2-2 479 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 471 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 584 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 200 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 159 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 564 bp overlap
ChIP DE DE-GATA4-2 512 bp overlap
ChIP foregut GSE117136.GATA4.foregut 342 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 369 bp overlap
ChIP DE DE-GATA6-2 442 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 487 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 288 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 444 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
HAND2 5 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
Irf1 4 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCFF064TDQ 461 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 289 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 185 bp overlap
MYF5 5 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap
Motif DE_48h DE_48h-MYF5_MA1641.2 8 bp overlap
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 252 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 310 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 134 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 238 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_alpha-amanitin-30min GSE118494.NCAPH2.IMR-90_alpha-amanitin-30min 230 bp overlap
NEUROD1 5 datasets
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_48h DE_48h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif ES_0h ES_0h-NEUROD1_MA1109.2 8 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 405 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 622 bp overlap
NKX2-4 5 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_36h DE_36h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 531 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 206 bp overlap
Neurod2 10 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif DE_48h DE_48h-Neurod2_MA0668.3 8 bp overlap
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA0668.3 8 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 5 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
Ptf1A 5 datasets
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_48h DE_48h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 522 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 416 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 324 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 414 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 319 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 481 bp overlap
SRF 2 datasets
ChIP Ishikawa ENCFF992QXM 305 bp overlap
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 402 bp overlap
STAT1::STAT2 4 datasets
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_48h DE_48h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
TCF12 3 datasets
ChIP Ishikawa ENCFF467DDW 426 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 711 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 132 bp overlap
TEAD3 5 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap
Motif DE_48h DE_48h-TEAD3_MA0808.1 8 bp overlap
Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP Ishikawa ENCFF772OTG 225 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 491 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 317 bp overlap
Tcf12 5 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 5 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 125 bp overlap
ZBTB18 5 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_48h DE_48h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
Motif ES_0h ES_0h-ZBTB18_MA0698.2 11 bp overlap
ZNF16 3 datasets
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 199 bp overlap
ZNF211 5 datasets
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
Motif DE_36h DE_36h-ZNF211_MA1974.2 10 bp overlap
Motif DE_48h DE_48h-ZNF211_MA1974.2 10 bp overlap
Motif DE_60h DE_60h-ZNF211_MA1974.2 10 bp overlap
Motif ES_0h ES_0h-ZNF211_MA1974.2 10 bp overlap
ZNF398 1 dataset
ChIP H9 GSE133630.ZNF398.H9 154 bp overlap
ZNF410 5 datasets
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap
Motif DE_48h DE_48h-ZNF410_MA0752.2 16 bp overlap
Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap
Motif ES_0h ES_0h-ZNF410_MA0752.2 16 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 215 bp overlap
ZSCAN4 2 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zic2 5 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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