chr7 : 102,967,872 102,968,568
696 bp 55 TFs 1 linked gene
This 696 bp open chromatin element is linked to NFE4 and is bound by 55 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NFE4 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:102,962,872 – 102,973,568
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
AR 1 dataset
ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 344 bp overlap
Ar 1 dataset
Motif DE_60h DE_60h-Ar_MA0007.4 16 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 146 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 273 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 251 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 181 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 199 bp overlap
EP300 1 dataset
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 185 bp overlap
FOXA2 8 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 473 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 619 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 323 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 383 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 262 bp overlap
ChIP DE DE-FOXA2-1 696 bp overlap
ChIP DE DE-FOXA2-2 696 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 285 bp overlap
FOXL2 1 dataset
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 367 bp overlap
GATA1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 238 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 200 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 451 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 513 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 197 bp overlap
ChIP DE DE-GATA4-1 696 bp overlap
ChIP DE DE-GATA4-2 696 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 252 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 441 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 457 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 696 bp overlap
ChIP DE DE-GATA6-2 696 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 445 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 312 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 696 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 499 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 392 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 612 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 344 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 388 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 261 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 410 bp overlap
ChIP K562 ENCFF055GAZ 434 bp overlap
ChIP K562 ENCFF317JJX 429 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 276 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 124 bp overlap
MYF5 1 dataset
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
MYF6 1 dataset
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
MYOD1 3 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 190 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 186 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-30min GSE118494.NCAPH2.IMR-90_Triptolide-30min 427 bp overlap
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 238 bp overlap
NR3C1 1 dataset
Motif DE_60h DE_60h-NR3C1_MA0113.4 15 bp overlap
NR3C2 1 dataset
Motif DE_60h DE_60h-NR3C2_MA0727.2 15 bp overlap
NR4A1 2 datasets
ChIP K562 ENCFF998LHF 465 bp overlap
ChIP K562 ENCFF998LHF 465 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 451 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 431 bp overlap
ONECUT2 3 datasets
ChIP A-549 GSE102599.ONECUT2.A-549 487 bp overlap
ChIP PC-3_hypoxia GSE106305.ONECUT2.PC-3_hypoxia 202 bp overlap
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 220 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 158 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 276 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 181 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 223 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 221 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 696 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 306 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 406 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 148 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 147 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 210 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 177 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
ZBTB18 1 dataset
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap