chr7 : 68,866,175 – 68,867,356
1,181 bp 102 TFs 0 linked genes
This 1.2 kb open chromatin element has no linked target genes and is bound by 102 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:68,861,175 – 68,872,356
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_48h DE_48h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_48h DE_48h-ARGFX_MA1463.2 8 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 81 bp overlap
Alx1 1 dataset
Motif DE_48h DE_48h-Alx1_MA0854.2 8 bp overlap
Alx4 1 dataset
Motif DE_48h DE_48h-Alx4_MA0853.2 12 bp overlap
Arid3a 2 datasets
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
Arid3b 1 dataset
Motif DE_48h DE_48h-Arid3b_MA0601.2 7 bp overlap
Arx 1 dataset
Motif DE_48h DE_48h-Arx_MA0874.2 10 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 370 bp overlap
BRD4 3 datasets
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 191 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 201 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 246 bp overlap
DRGX 1 dataset
Motif DE_48h DE_48h-DRGX_MA1481.2 6 bp overlap
EMX1 1 dataset
Motif DE_48h DE_48h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_48h DE_48h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_48h DE_48h-EN1_MA0027.3 6 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 191 bp overlap
ChIP hESC GSE26097.EOMES.hESC 211 bp overlap
ESX1 1 dataset
Motif DE_48h DE_48h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_48h DE_48h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_48h DE_48h-EVX2_MA0888.2 6 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 349 bp overlap
ChIP DE DE-FOXA2-1 575 bp overlap
ChIP DE DE-FOXA2-2 326 bp overlap
ChIP DE DE-FOXA2-2 607 bp overlap
GATA1 2 datasets
Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 336 bp overlap
ChIP DE DE-GATA4-1 560 bp overlap
ChIP DE DE-GATA4-2 1045 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 372 bp overlap
ChIP DE DE-GATA6-1 583 bp overlap
ChIP DE DE-GATA6-2 1030 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1065 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1086 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1024 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 1133 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1052 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 1063 bp overlap
GSX1 1 dataset
Motif DE_48h DE_48h-GSX1_MA0892.2 6 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HOXA1 1 dataset
Motif DE_48h DE_48h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_48h DE_48h-HOXA2_MA0900.3 6 bp overlap
HOXA4 2 datasets
Motif DE_48h DE_48h-HOXA4_MA1496.2 7 bp overlap
Motif DE_72h DE_72h-HOXA4_MA1496.2 7 bp overlap
HOXB2 1 dataset
Motif DE_48h DE_48h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_48h DE_48h-HOXB3_MA0903.2 6 bp overlap
HOXB4 2 datasets
Motif DE_48h DE_48h-HOXB4_MA1499.2 6 bp overlap
Motif DE_72h DE_72h-HOXB4_MA1499.2 6 bp overlap
HOXB5 1 dataset
Motif DE_48h DE_48h-HOXB5_MA0904.3 6 bp overlap
HOXB9 2 datasets
Motif DE_48h DE_48h-HOXB9_MA1503.2 9 bp overlap
Motif DE_72h DE_72h-HOXB9_MA1503.2 9 bp overlap
HOXC10 2 datasets
Motif DE_48h DE_48h-HOXC10_MA0905.2 9 bp overlap
Motif DE_72h DE_72h-HOXC10_MA0905.2 9 bp overlap
HOXC11 2 datasets
Motif DE_48h DE_48h-HOXC11_MA0651.3 11 bp overlap
Motif DE_72h DE_72h-HOXC11_MA0651.3 11 bp overlap
HOXC12 2 datasets
Motif DE_48h DE_48h-HOXC12_MA0906.2 10 bp overlap
Motif DE_72h DE_72h-HOXC12_MA0906.2 10 bp overlap
HOXC4 2 datasets
Motif DE_48h DE_48h-HOXC4_MA1504.2 6 bp overlap
Motif DE_72h DE_72h-HOXC4_MA1504.2 6 bp overlap
HOXC8 1 dataset
Motif DE_48h DE_48h-HOXC8_MA1505.2 6 bp overlap
HOXC9 2 datasets
Motif DE_48h DE_48h-HOXC9_MA0485.3 9 bp overlap
Motif DE_72h DE_72h-HOXC9_MA0485.3 9 bp overlap
HOXD10 2 datasets
Motif DE_48h DE_48h-HOXD10_MA1506.2 10 bp overlap
Motif DE_72h DE_72h-HOXD10_MA1506.2 10 bp overlap
HOXD11 2 datasets
Motif DE_48h DE_48h-HOXD11_MA0908.2 9 bp overlap
Motif DE_72h DE_72h-HOXD11_MA0908.2 9 bp overlap
HOXD12 2 datasets
Motif DE_48h DE_48h-HOXD12_MA0873.2 10 bp overlap
Motif DE_72h DE_72h-HOXD12_MA0873.2 10 bp overlap
HOXD4 2 datasets
Motif DE_48h DE_48h-HOXD4_MA1507.2 6 bp overlap
Motif DE_72h DE_72h-HOXD4_MA1507.2 6 bp overlap
Hmx1 1 dataset
Motif DE_48h DE_48h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_48h DE_48h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
Hoxa11 2 datasets
Motif DE_48h DE_48h-Hoxa11_MA0911.2 9 bp overlap
Motif DE_72h DE_72h-Hoxa11_MA0911.2 9 bp overlap
IRF3 2 datasets
Motif DE_48h DE_48h-IRF3_MA1418.2 17 bp overlap
Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap
ISX 1 dataset
Motif DE_48h DE_48h-ISX_MA0654.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 368 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 538 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 531 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 138 bp overlap
LHX6 1 dataset
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif DE_48h DE_48h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_48h DE_48h-LMX1B_MA0703.3 8 bp overlap
Lhx4 1 dataset
Motif DE_48h DE_48h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_48h DE_48h-Lhx8_MA0705.2 6 bp overlap
MEIS1 2 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MIXL1 1 dataset
Motif DE_48h DE_48h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_48h DE_48h-MNX1_MA0707.3 6 bp overlap
MYF6 2 datasets
Motif DE_48h DE_48h-MYF6_MA0667.1 10 bp overlap
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
Mecom 2 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
Msgn1 2 datasets
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NANOG 5 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 191 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 541 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 317 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 270 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 301 bp overlap
NKX6-1 3 datasets
Motif DE_48h DE_48h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_48h DE_48h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_72h DE_72h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_48h DE_48h-NKX6-2_MA0675.2 6 bp overlap
NKX6-3 2 datasets
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_72h DE_72h-NKX6-3_MA1530.2 8 bp overlap
NOTO 1 dataset
Motif DE_48h DE_48h-NOTO_MA0710.2 7 bp overlap
PAX4 1 dataset
Motif DE_48h DE_48h-PAX4_MA0068.2 8 bp overlap
PDX1 1 dataset
Motif DE_48h DE_48h-PDX1_MA0132.3 6 bp overlap
POU6F1 3 datasets
Motif DE_48h DE_48h-POU6F1_MA0628.2 6 bp overlap
Motif DE_48h DE_48h-POU6F1_MA1549.2 7 bp overlap
Motif DE_72h DE_72h-POU6F1_MA1549.2 7 bp overlap
POU6F2 2 datasets
Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap
Motif DE_72h DE_72h-POU6F2_MA0793.2 9 bp overlap
PRRX1 1 dataset
Motif DE_48h DE_48h-PRRX1_MA0716.2 6 bp overlap
Prdm14 2 datasets
Motif DE_48h DE_48h-Prdm14_MA1998.2 8 bp overlap
Motif DE_72h DE_72h-Prdm14_MA1998.2 8 bp overlap
RAX2 1 dataset
Motif DE_48h DE_48h-RAX2_MA0717.2 6 bp overlap
SHOX 1 dataset
Motif DE_48h DE_48h-SHOX_MA0630.2 6 bp overlap
SIX1 2 datasets
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 1079 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 1150 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 1069 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 1047 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1145 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 857 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 214 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 803 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1133 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 321 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1165 bp overlap
Shox2 1 dataset
Motif DE_48h DE_48h-Shox2_MA0720.2 6 bp overlap
Six4 2 datasets
Motif DE_48h DE_48h-Six4_MA2001.2 7 bp overlap
Motif DE_72h DE_72h-Six4_MA2001.2 7 bp overlap
Stat6 3 datasets
Motif DE_24h DE_24h-Stat6_MA0520.2 10 bp overlap
Motif DE_48h DE_48h-Stat6_MA0520.2 10 bp overlap
Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap
TCF7L1 2 datasets
Motif DE_48h DE_48h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_48h DE_48h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
TLX2 1 dataset
Motif DE_48h DE_48h-TLX2_MA1577.2 6 bp overlap
TP53 2 datasets
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 379 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 272 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
UNCX 1 dataset
Motif DE_48h DE_48h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_48h DE_48h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_48h DE_48h-VAX2_MA0723.3 6 bp overlap
VENTX 1 dataset
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
VSX1 1 dataset
Motif DE_48h DE_48h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_48h DE_48h-VSX2_MA0726.2 7 bp overlap
ZFP42 2 datasets
Motif DE_24h DE_24h-ZFP42_MA1651.2 13 bp overlap
Motif DE_72h DE_72h-ZFP42_MA1651.2 13 bp overlap
ZNF317 2 datasets
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
Motif DE_72h DE_72h-ZNF317_MA1593.2 8 bp overlap
ZNF354A 1 dataset
Motif DE_48h DE_48h-ZNF354A_MA1978.2 20 bp overlap
ZNF528 2 datasets
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF549 2 datasets
Motif DE_24h DE_24h-ZNF549_MA1728.2 8 bp overlap
Motif DE_48h DE_48h-ZNF549_MA1728.2 8 bp overlap
ZNF766 3 datasets
Motif DE_24h DE_24h-ZNF766_MA2098.1 9 bp overlap
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
mix-a 1 dataset
Motif DE_48h DE_48h-mix-a_MA0621.2 7 bp overlap
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