chr6 : 118,207,494 – 118,208,313

819 bp 80 TFs 0 linked genes

This 819 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

80 transcription factors

BARX1 1 dataset

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

CREB1 1 dataset

Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap

CTCF 3 datasets

Motif DE_48h DE_48h-CTCF_MA1930.2 33 bp overlap

ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 188 bp overlap

ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 363 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 289 bp overlap

DLX1 1 dataset

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 288 bp overlap

ESR1 6 datasets

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 266 bp overlap

ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 224 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 299 bp overlap

ChIP MCF-7_E2-ICI GSE67295.ESR1.MCF-7_E2-ICI 171 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 321 bp overlap

ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 283 bp overlap

ESRRA 1 dataset

Motif DE_48h DE_48h-ESRRA_MA0592.4 9 bp overlap

ESRRB 1 dataset

Motif DE_48h DE_48h-ESRRB_MA0141.4 10 bp overlap

Esrrg 1 dataset

Motif DE_48h DE_48h-Esrrg_MA0643.2 9 bp overlap

FOXP1 1 dataset

ChIP neural-progenitor GSE62718.FOXP1.neural-progenitor 435 bp overlap

Foxq1 1 dataset

Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap

GATA2 2 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 278 bp overlap

GATA4 4 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap

ChIP DE DE-GATA4-1 544 bp overlap

ChIP DE DE-GATA4-2 682 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

GATA6 10 datasets

ChIP AGS GSE51936.GATA6.AGS 108 bp overlap

ChIP DE DE-GATA6-1 436 bp overlap

ChIP DE DE-GATA6-2 644 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 592 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 633 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 715 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 637 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 814 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 750 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 502 bp overlap

GBX2 1 dataset

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

HNRNPK 1 dataset

ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 195 bp overlap

HOXA6 1 dataset

Motif DE_48h DE_48h-HOXA6_MA1497.2 7 bp overlap

HOXA7 1 dataset

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

HOXB6 1 dataset

Motif DE_48h DE_48h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_48h DE_48h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_48h DE_48h-HOXB8_MA1502.2 7 bp overlap

HOXD8 1 dataset

Motif DE_48h DE_48h-HOXD8_MA0910.3 7 bp overlap

Hmx1 1 dataset

Motif DE_48h DE_48h-Hmx1_MA0896.2 9 bp overlap

Hmx2 1 dataset

Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap

Hmx3 1 dataset

Motif DE_48h DE_48h-Hmx3_MA0898.2 9 bp overlap

JUN 2 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 518 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 535 bp overlap

JUN::JUNB 1 dataset

Motif DE_48h DE_48h-JUNJUNB_MA1132.2 8 bp overlap

LBX2 1 dataset

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

LMO2 1 dataset

ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 158 bp overlap

MORC2 1 dataset

ChIP HeLa_V5-HUSH-KO GSE95451.MORC2.HeLa_V5-HUSH-KO 195 bp overlap

MSX1 1 dataset

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Msgn1 1 dataset

Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap

Msx3 1 dataset

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

NR5A1 1 dataset

Motif DE_48h DE_48h-NR5A1_MA1540.3 12 bp overlap

Nobox 1 dataset

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_48h DE_48h-Nr1h3Rxra_MA0494.2 16 bp overlap

Nr5A2 1 dataset

Motif DE_48h DE_48h-Nr5A2_MA0505.3 9 bp overlap

PPARA::RXRA 1 dataset

Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap

PRDM9 1 dataset

Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap

Pgr 1 dataset

Motif DE_48h DE_48h-Pgr_MA2323.1 17 bp overlap

RAX 1 dataset

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 213 bp overlap

Rarg 1 dataset

Motif DE_48h DE_48h-Rarg_MA0860.1 17 bp overlap

SIX2 1 dataset

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 107 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 704 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 733 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 527 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 518 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 646 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 400 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 393 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 484 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 722 bp overlap

SP5 1 dataset

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

SPI1 1 dataset

ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 195 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 288 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 241 bp overlap

TET2 1 dataset

ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 198 bp overlap

THRA 1 dataset

Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap

THRB 3 datasets

Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap

Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap

TP53 1 dataset

ChIP H9 GSE39912.TP53.H9 234 bp overlap

Wt1 1 dataset

Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 363 bp overlap

ZIM3 1 dataset

Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap

ZNF136 1 dataset

Motif DE_48h DE_48h-ZNF136_MA1588.1 15 bp overlap

ZNF148 1 dataset

Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap

ZNF257 1 dataset

Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap

ZNF281 1 dataset

Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap

ZNF35 1 dataset

Motif DE_48h DE_48h-ZNF35_MA2333.1 7 bp overlap

ZNF558 1 dataset

Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap

ZNF582 1 dataset

Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 169 bp overlap

ZSCAN4 2 datasets

ChIP HEK293 ENCFF381BKT 436 bp overlap

ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 303 bp overlap