chr6 : 78,570,125 78,570,407
282 bp 76 TFs 0 linked genes
This 282 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:78,565,125 – 78,575,407
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CDX1 1 dataset
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CEBPA 1 dataset
Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 280 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 277 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
HOXA10 1 dataset
Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB13 2 datasets
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
Hmx1 1 dataset
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif ES_0h ES_0h-Hmx3_MA0898.2 9 bp overlap
Hoxa13 1 dataset
Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
MAX 2 datasets
ChIP WA01 ENCSR000EUP.MAX.WA01 81 bp overlap
ChIP WTC11 ENCFF223QFY 282 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 8 datasets
ChIP H1 ENCFF747ZPQ 222 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 282 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 276 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 120 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 282 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 282 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 282 bp overlap
ChIP hESC GSE18292.NANOG.hESC 138 bp overlap
NFIB 1 dataset
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR1I3 1 dataset
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
NR4A2 1 dataset
Motif ES_0h ES_0h-NR4A2_MA0160.3 8 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 13 datasets
ChIP BG03 GSE21614.POU5F1.BG03 176 bp overlap
ChIP H1 ENCFF698ZAP 190 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 282 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 282 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 142 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 282 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 272 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 134 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 282 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 282 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 230 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 165 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 178 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Pou5f1::Sox2 2 datasets
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
SATB1 1 dataset
Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 281 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 282 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 269 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 282 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 282 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 282 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 2 datasets
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 3 datasets
Motif ES_0h ES_0h-TFAP2C_MA0815.1 13 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 282 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 282 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 282 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 282 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 265 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 177 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 189 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 211 bp overlap
ZNF454 1 dataset
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF675 1 dataset
Motif ES_0h ES_0h-ZNF675_MA1714.2 19 bp overlap
ZNF684 1 dataset
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
Zfx 1 dataset
Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap