chr6 : 21,368,004 21,368,449
445 bp 71 TFs 0 linked genes
This 445 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:21,363,004 – 21,373,449
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AR 18 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 64 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 91 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 64 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 82 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 85 bp overlap
ChIP VCaP-LTAD_DHT_1nM GSE94577.AR.VCaP-LTAD_DHT_1nM 80 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 200 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 73 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 125 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 200 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 80 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 86 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 107 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 57 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 101 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 88 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 104 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 157 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 184 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 72 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE120715.BRD2.K-562_DMSO 87 bp overlap
BRD4 4 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 411 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 440 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 438 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 143 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 293 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 297 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
ELF3 1 dataset
ChIP HepG2 ENCFF633ULY 141 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 213 bp overlap
ERG 2 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 80 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 71 bp overlap
ETV5 1 dataset
ChIP HepG2 ENCFF456LSA 80 bp overlap
FOXA1 3 datasets
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 81 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 181 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 50 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 308 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 216 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 211 bp overlap
FOXO1 1 dataset
ChIP HepG2 ENCFF088FIR 112 bp overlap
GABPA 2 datasets
ChIP VCaP GSE49091.GABPA.VCaP 104 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 110 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 82 bp overlap
HOXB13 3 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 59 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 69 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 67 bp overlap
HSF1 1 dataset
Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
JARID2 1 dataset
ChIP HepG2 ENCFF484QCT 227 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 426 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 153 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 181 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 443 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 445 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 376 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 396 bp overlap
ChIP hESC GSE18292.NANOG.hESC 220 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 210 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 292 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
PGR 5 datasets
ChIP T-47D GSE31129.PGR.T-47D 85 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 54 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 51 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 81 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 118 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 102 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 266 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 445 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 164 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 112 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SMAD2-3 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 205 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 393 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 445 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 428 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 336 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 407 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 194 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 177 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 352 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 175 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 75 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 351 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 233 bp overlap
TEAD1 1 dataset
ChIP HepG2 ENCFF661PNM 106 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 173 bp overlap
TEAD4 1 dataset
ChIP HepG2 ENCFF006QNB 107 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 255 bp overlap
TP63 9 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 91 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 125 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 118 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 50 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 65 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 137 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 122 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 97 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 70 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 133 bp overlap
ZBTB43 1 dataset
ChIP HepG2 ENCFF487RQI 62 bp overlap
ZFP82 2 datasets
ChIP HepG2 ENCFF665HBX 67 bp overlap
ChIP HepG2 ENCFF665HBX 331 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 130 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 104 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap