chr6 : 12,666,972 12,667,721
749 bp 57 TFs 0 linked genes
This 749 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:12,661,972 – 12,672,721
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 175 bp overlap
BCL6B 1 dataset
Motif DE_72h DE_72h-BCL6B_MA0731.1 17 bp overlap
BRD4 2 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 214 bp overlap
ChIP hESC GSE33281.BRD4.hESC 80 bp overlap
CEBPA 1 dataset
Motif DE_72h DE_72h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_72h DE_72h-CEBPD_MA0836.3 8 bp overlap
CTCF 3 datasets
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
Motif DE_72h DE_72h-CTCF_MA1929.2 31 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 334 bp overlap
ChIP BLaER1 ENCFF460KDD 259 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 117 bp overlap
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 127 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 194 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 218 bp overlap
EZH2 1 dataset
ChIP PC-9 ENCFF634ONR 106 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 557 bp overlap
ChIP DE DE-FOXA2-2 505 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 233 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 570 bp overlap
ChIP DE DE-GATA4-2 590 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 528 bp overlap
ChIP DE DE-GATA6-2 631 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 522 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 675 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 525 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 672 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 415 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 289 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 138 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
IRF2 1 dataset
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
IRF3 1 dataset
Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap
IRF7 1 dataset
Motif DE_72h DE_72h-IRF7_MA0772.2 13 bp overlap
IRF9 1 dataset
Motif DE_72h DE_72h-IRF9_MA0653.1 15 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 325 bp overlap
KLF13 1 dataset
Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 249 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 235 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_72h DE_72h-MEIS3_MA0775.2 7 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 197 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 293 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 77 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NR2F1 4 datasets
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
Motif DE_48h DE_48h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap
Nr2F6 4 datasets
Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_48h DE_48h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap
PRDM9 4 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
RELA 1 dataset
Motif DE_72h DE_72h-RELA_MA0107.1 10 bp overlap
RUNX1 8 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 158 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 158 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 225 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 218 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 199 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 179 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 185 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 258 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 113 bp overlap
Rarb 4 datasets
Motif DE_36h DE_36h-Rarb_MA0857.1 16 bp overlap
Motif DE_48h DE_48h-Rarb_MA0857.1 16 bp overlap
Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap
Motif DE_72h DE_72h-Rarb_MA0857.1 16 bp overlap
Rarg 4 datasets
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
Motif DE_48h DE_48h-Rarg_MA0859.2 15 bp overlap
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 262 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 273 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 408 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 440 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 276 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 516 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 305 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 528 bp overlap
SPI1 2 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 177 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 204 bp overlap
TBP 1 dataset
Motif DE_72h DE_72h-TBP_MA0108.3 7 bp overlap
VEZF1 1 dataset
Motif DE_72h DE_72h-VEZF1_MA1578.2 6 bp overlap
ZNF341 1 dataset
Motif DE_72h DE_72h-ZNF341_MA1655.2 8 bp overlap
ZNF449 1 dataset
Motif DE_72h DE_72h-ZNF449_MA1656.2 10 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF667 4 datasets
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF701 1 dataset
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif DE_72h DE_72h-ZNF707_MA1715.1 15 bp overlap