chr5 : 157,639,801 – 157,640,289

488 bp 60 TFs 0 linked genes

This 488 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

ARID1B 1 dataset

ChIP K-562 ENCSR822CCM.ARID1B.K-562 200 bp overlap

ARNT::HIF1A 1 dataset

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

ATF2 3 datasets

Motif DE_36h DE_36h-ATF2_MA1632.2 10 bp overlap

ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 290 bp overlap

ChIP HepG2 ENCFF955VER 381 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 347 bp overlap

ChIP K562 ENCFF673OEZ 144 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 224 bp overlap

DUX4 2 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 227 bp overlap

E2F6 1 dataset

Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap

E2F7 1 dataset

Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap

ELF1 1 dataset

Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap

ELF3 1 dataset

Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap

ESR1 2 datasets

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 122 bp overlap

ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 125 bp overlap

Erg 1 dataset

Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap

FOS 1 dataset

Motif DE_36h DE_36h-FOS_MA1951.2 13 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 311 bp overlap

GABPA 1 dataset

Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap

GATA1 2 datasets

ChIP K-562 GSE107726.GATA1.K-562 256 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 172 bp overlap

GATA1::TAL1 1 dataset

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 488 bp overlap

ChIP DE DE-GATA4-2 488 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 488 bp overlap

ChIP DE DE-GATA6-2 488 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 488 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 488 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 488 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 488 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 488 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 488 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 475 bp overlap

GFI1B 1 dataset

ChIP K-562 ENCSR509GDT.GFI1B.K-562 255 bp overlap

HDAC1 1 dataset

ChIP K-562 ENCSR387UWP.HDAC1.K-562 216 bp overlap

HDAC2 1 dataset

ChIP K-562 ENCSR893WSB.HDAC2.K-562 255 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 147 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

KDM1A 3 datasets

ChIP K-562 ENCSR908CMW.KDM1A.K-562 299 bp overlap

ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 165 bp overlap

ChIP K562 ENCFF128TYE 436 bp overlap

Lhx3 1 dataset

Motif DE_36h DE_36h-Lhx3_MA0135.2 12 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap

MEIS2 1 dataset

Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap

NRF1 1 dataset

ChIP K562 ENCFF689EWI 80 bp overlap

PBX1 1 dataset

Motif DE_36h DE_36h-PBX1_MA0070.2 9 bp overlap

PBX2 1 dataset

Motif DE_36h DE_36h-PBX2_MA1113.3 9 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 206 bp overlap

POU2F1 1 dataset

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 221 bp overlap

POU3F2 1 dataset

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

POU3F3 1 dataset

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

RUNX3 1 dataset

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

SCRT1 1 dataset

Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap

SCRT2 1 dataset

Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 177 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 488 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 488 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 487 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 318 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 488 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 446 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 488 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 432 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 488 bp overlap

SPI1 1 dataset

ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap

SPIC 1 dataset

Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap

SREBF1 1 dataset

Motif DE_36h DE_36h-SREBF1_MA0829.3 10 bp overlap

SUZ12 1 dataset

ChIP ProEs GSE59087.SUZ12.ProEs 150 bp overlap

Spi1 1 dataset

Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap

TAL1 7 datasets

ChIP K-562 ENCSR106FRG.TAL1.K-562 253 bp overlap

ChIP K-562 GSE107726.TAL1.K-562 171 bp overlap

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 168 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 208 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 187 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 201 bp overlap

ChIP K562 ENCFF620GMX 385 bp overlap

TCF3 1 dataset

ChIP K-562 ENCSR970OJY.TCF3.K-562 163 bp overlap

ZBTB7A 1 dataset

Motif DE_36h DE_36h-ZBTB7A_MA0750.3 9 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZNF10 2 datasets

ChIP HEK293 ENCFF611ZJI 385 bp overlap

ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 363 bp overlap

ZNF214 1 dataset

Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap

ZNF24 2 datasets

ChIP K-562 ENCSR099NCH.ZNF24.K-562 417 bp overlap

ChIP K-562 ENCSR385AHH.ZNF24.K-562 266 bp overlap

ZNF320 1 dataset

Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap

ZNF682 1 dataset

Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap

ZNF708 1 dataset

Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap