chr5 : 123,582,690 – 123,583,131
441 bp 64 TFs 0 linked genes
This 441 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:123,577,690 – 123,588,131
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 1 dataset
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 231 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 209 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 118 bp overlap
CDK8 1 dataset
ChIP myometrium_PT1063 GSE128230.CDK8.myometrium_PT1063 73 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 126 bp overlap
CEBPA 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 114 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 441 bp overlap
CTCF 4 datasets
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 190 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 155 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 338 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 219 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
EHF 1 dataset
ChIP primary-bronchial-epithelial GSE85401.EHF.primary-bronchial-epithelial 63 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 124 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 137 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERG 9 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 132 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 107 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 110 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 78 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 143 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 77 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 119 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 65 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 145 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 101 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 110 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 218 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 174 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 139 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 53 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 77 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 160 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 75 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 194 bp overlap
MLLT1 1 dataset
ChIP MOLM-13 GSE82116.MLLT1.MOLM-13 423 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 201 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 193 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 116 bp overlap
ChIP H1 ENCFF747ZPQ 206 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 441 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 238 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 441 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 441 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 441 bp overlap
ChIP hESC GSE18292.NANOG.hESC 270 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR338MMB.NR2F2.liver 130 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU5F1 9 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 441 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 253 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 441 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 196 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 194 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 352 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 292 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 150 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 209 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Pou5f1::Sox2 1 dataset
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm4 1 dataset
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 198 bp overlap
RELA 9 datasets
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 173 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 90 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 160 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 195 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 141 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 136 bp overlap
RUNX1 4 datasets
ChIP SKH1 GSE87283.RUNX1.SKH1 169 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 115 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 154 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 114 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 227 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 153 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 178 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 184 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 314 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 258 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 398 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 357 bp overlap
SMARCC1 3 datasets
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 182 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 158 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 421 bp overlap
SPI1 33 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 134 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 239 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 113 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 86 bp overlap
ChIP DC GSE123347.SPI1.DC 97 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 140 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 101 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 187 bp overlap
ChIP GM12891 ENCFF563IUT 123 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 85 bp overlap
ChIP HL-60 ENCFF645GBT 92 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 208 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 92 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 61 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 136 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 112 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 132 bp overlap
ChIP ME-1 GSE46044.SPI1.ME-1 139 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 119 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 89 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 91 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 129 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 163 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 145 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 124 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 125 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 80 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 144 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 108 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 126 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 79 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 95 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 159 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 170 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 246 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 89 bp overlap
ZIM3 3 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap
Huangfu Lab · Publications · Resources · Contact