chr5 : 91,487,388 91,488,150
762 bp 79 TFs 0 linked genes
This 762 bp open chromatin element has no linked target genes and is bound by 79 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:91,482,388 – 91,493,150
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
Arid3b 1 dataset
Motif DE_60h DE_60h-Arid3b_MA0601.2 7 bp overlap
BARX1 1 dataset
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BRD4 2 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 205 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 487 bp overlap
BSX 1 dataset
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CTCF 1 dataset
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
DLX1 1 dataset
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap
E2F6 1 dataset
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 186 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF018MKA 220 bp overlap
FOSL2 1 dataset
Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 502 bp overlap
ChIP DE DE-FOXA2-2 353 bp overlap
FOXH1 1 dataset
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 124 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 407 bp overlap
ChIP DE DE-GATA4-2 519 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 475 bp overlap
ChIP DE DE-GATA6-2 570 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 520 bp overlap
GBX2 1 dataset
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA6 1 dataset
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
HOXD9 1 dataset
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hmx1 1 dataset
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 368 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 130 bp overlap
LBX2 1 dataset
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
MSX1 1 dataset
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MYB 2 datasets
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Msx3 1 dataset
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NANOG 4 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 162 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 661 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 323 bp overlap
ChIP hESC GSE18292.NANOG.hESC 222 bp overlap
NKX2-4 1 dataset
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 150 bp overlap
Nobox 1 dataset
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 191 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 191 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 213 bp overlap
RAX 1 dataset
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 112 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 271 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 572 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 474 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 375 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 284 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 319 bp overlap
SMARCC1 2 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 242 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 192 bp overlap
SOX13 1 dataset
Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 280 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 395 bp overlap
SOX2 2 datasets
Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 336 bp overlap
Sox17 1 dataset
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
TAL1 1 dataset
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 142 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 134 bp overlap
TFAP2C 1 dataset
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
Tfcp2l1 1 dataset
Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 120 bp overlap
ZNF331 1 dataset
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF416 1 dataset
Motif DE_60h DE_60h-ZNF416_MA1979.2 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 181 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN16 1 dataset
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap