chr5 : 74,765,016 74,765,573
557 bp 46 TFs 2 linked genes
This 557 bp open chromatin element is linked to GFM2 and NSA2 and is bound by 46 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
GFM2 1.5 kb Proximal Proximity
NSA2 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:74,760,016 – 74,770,573
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 154 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 326 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 126 bp overlap
BRD4 3 datasets
ChIP K-562 GSE140325.BRD4.K-562 152 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 149 bp overlap
ChIP MV4-11_IBET151_5000nM GSE120715.BRD4.MV4-11_IBET151_5000nM 131 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 166 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 378 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 345 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 282 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 159 bp overlap
ESR1 2 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 347 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 209 bp overlap
FOXA1 2 datasets
ChIP PDAC GSE64557.FOXA1.PDAC 416 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 421 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 463 bp overlap
ChIP DE DE-FOXA2-2 534 bp overlap
ChIP HepG2 ENCFF570ABM 180 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 506 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 439 bp overlap
ChIP DE DE-GATA4-2 557 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 508 bp overlap
ChIP DE DE-GATA6-2 557 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 390 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 324 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 112 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 332 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 361 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 402 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 194 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 227 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 220 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 206 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 315 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 105 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 368 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 469 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 276 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 195 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 325 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 235 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 196 bp overlap
RELA 2 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 150 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 198 bp overlap
RFX1 7 datasets
ChIP Hep-G2 ENCSR928API.RFX1.Hep-G2 316 bp overlap
ChIP HepG2 ENCFF144SCF 424 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 391 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 352 bp overlap
ChIP K562 ENCFF421AVO 178 bp overlap
ChIP MCF-7 ENCFF782EZS 206 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 382 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 190 bp overlap
SKI 2 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 464 bp overlap
ChIP HepG2 ENCFF631IPX 359 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 516 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 537 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 515 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 444 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 390 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 207 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 426 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 557 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 218 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 428 bp overlap
TAL1 2 datasets
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 143 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 317 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 173 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCFF436CGE 164 bp overlap