chr5 : 42,971,072 – 42,971,465
393 bp 55 TFs 0 linked genes
This 393 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:42,966,072 – 42,976,465
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 156 bp overlap
BRD4 1 dataset
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 75 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 256 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 229 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 356 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 129 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 145 bp overlap
CTCF 278 datasets
ChIP 22Rv1 ENCFF466OXN 393 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 319 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 367 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 361 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 281 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 208 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 202 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 221 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 165 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 290 bp overlap
ChIP A549 ENCFF034FVO 108 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP A549 ENCFF434LUY 228 bp overlap
ChIP A549 ENCFF669BWC 393 bp overlap
ChIP A673 ENCFF123WOM 209 bp overlap
ChIP A673 ENCFF123WOM 96 bp overlap
ChIP AG04449 ENCFF248MBD 181 bp overlap
ChIP AG04450 ENCFF116DJL 261 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 160 bp overlap
ChIP BJ ENCFF434HEC 261 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 218 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 210 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 364 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 393 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 225 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP DND-41 ENCFF913MRA 280 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 162 bp overlap
ChIP DU145 GSE121021.CTCF.DU145 202 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 291 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 162 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 193 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 154 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 221 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 143 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 129 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 208 bp overlap
ChIP GM12878 ENCFF635MMB 217 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 139 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM23338 ENCFF531QOI 264 bp overlap
ChIP GM23338 ENCFF772DML 199 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 351 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 77 bp overlap
ChIP H1 ENCFF764RHO 204 bp overlap
ChIP H54 ENCFF255TVO 177 bp overlap
ChIP H9 ENCFF152GTF 275 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 293 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 289 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 239 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 224 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 197 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 267 bp overlap
ChIP HCT116 ENCFF003KHP 190 bp overlap
ChIP HCT116 ENCFF003KHP 135 bp overlap
ChIP HCT116 ENCFF209YMI 253 bp overlap
ChIP HCT116 ENCFF373YMA 295 bp overlap
ChIP HEK293 ENCFF498RMM 243 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 259 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 181 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 225 bp overlap
ChIP HFF-Myc ENCFF680WYR 301 bp overlap
ChIP HFFc6 ENCFF005CJI 177 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 148 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 167 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 180 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 196 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 199 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 259 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 259 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 226 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 227 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 230 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 217 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 210 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 250 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 279 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 273 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 162 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 234 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 207 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 278 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 184 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 181 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 176 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 213 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 219 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 188 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 142 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 140 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 79 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 250 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 140 bp overlap
ChIP IMR-90 ENCFF887MRH 233 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 123 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 284 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 256 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 200 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 171 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 160 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 111 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 173 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 325 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 143 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 196 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 230 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 122 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 137 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF400DFR 226 bp overlap
ChIP K562 ENCFF430KTH 326 bp overlap
ChIP K562 ENCFF598YSU 263 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 203 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 214 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP Loucy ENCFF359TVQ 175 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 254 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 220 bp overlap
ChIP MCF-7 ENCFF139NQI 247 bp overlap
ChIP MCF-7 ENCFF162GNE 71 bp overlap
ChIP MCF-7 ENCFF198DQX 229 bp overlap
ChIP MCF-7 ENCFF210JUZ 336 bp overlap
ChIP MCF-7 ENCFF414SZG 107 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 88 bp overlap
ChIP MCF-7 ENCFF844STM 141 bp overlap
ChIP MCF-7 ENCFF954TUV 125 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 292 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 238 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 224 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 185 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 215 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 202 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 143 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 158 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 269 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 228 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 176 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 232 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 234 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 186 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 282 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 217 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 223 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 194 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 210 bp overlap
ChIP MIA-PaCa-2 GSE88734.CTCF.MIA-PaCa-2 130 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 273 bp overlap
ChIP NB4 ENCFF155DNY 245 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 124 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 324 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 228 bp overlap
ChIP PC-3 ENCFF487TUI 209 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 329 bp overlap
ChIP Panc1 ENCFF056JQX 316 bp overlap
ChIP RWPE2 ENCFF911IEE 223 bp overlap
ChIP RWPE2 ENCFF911IEE 264 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 197 bp overlap
ChIP SK-N-SH ENCFF575DMG 332 bp overlap
ChIP SK-N-SH ENCFF731NJX 241 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 256 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 234 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 230 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 179 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 206 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 123 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 227 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 304 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 135 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 99 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 224 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 181 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 137 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 393 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 286 bp overlap
ChIP adrenal gland ENCFF257AUK 336 bp overlap
ChIP adrenal gland ENCFF678WUB 280 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 261 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 200 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 207 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 253 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 247 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 256 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 293 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 292 bp overlap
ChIP chondrocyte ENCFF134ORZ 393 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 261 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 224 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 273 bp overlap
ChIP endodermal cell ENCFF471YCZ 247 bp overlap
ChIP endodermal cell ENCFF471YCZ 142 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 197 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 218 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 175 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 178 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 393 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 282 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 212 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 176 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 203 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 239 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 152 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 210 bp overlap
ChIP esophagus muscularis mucosa ENCFF534UGM 332 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 124 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 227 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 155 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 284 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 257 bp overlap
ChIP fibroblast of lung ENCFF356FDN 272 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 244 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 263 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 286 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 123 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 148 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 150 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 207 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 92 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 223 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 262 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 335 bp overlap
ChIP hESC GSE20650.CTCF.hESC 163 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 242 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 200 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 197 bp overlap
ChIP heart left ventricle ENCFF185CKY 289 bp overlap
ChIP heart left ventricle ENCFF244ZHV 158 bp overlap
ChIP heart left ventricle ENCFF354HOQ 329 bp overlap
ChIP heart left ventricle ENCFF505HGD 322 bp overlap
ChIP heart left ventricle ENCFF548XHH 301 bp overlap
ChIP heart left ventricle ENCFF832OXT 353 bp overlap
ChIP heart left ventricle ENCFF842XRG 293 bp overlap
ChIP heart left ventricle ENCFF888ERQ 348 bp overlap
ChIP heart right ventricle ENCFF027ORH 235 bp overlap
ChIP heart right ventricle ENCFF063GTP 336 bp overlap
ChIP heart right ventricle ENCFF435TKW 161 bp overlap
ChIP heart right ventricle ENCFF577TID 295 bp overlap
ChIP heart right ventricle ENCFF725NNJ 348 bp overlap
ChIP heart right ventricle ENCFF767XJQ 324 bp overlap
ChIP heart right ventricle ENCFF979TCT 357 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 157 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 210 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 174 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 215 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 227 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 223 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 219 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 222 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 141 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 249 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 259 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 295 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 202 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 269 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 169 bp overlap
ChIP lower lobe of left lung ENCFF906NCV 306 bp overlap
ChIP lower lobe of right lung ENCFF092XHT 339 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 251 bp overlap
ChIP neural progenitor cell ENCFF420RBO 283 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 130 bp overlap
ChIP osteoblast ENCFF491ZJZ 312 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 231 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.CTCF.peripheral-blood-neutrophil_PMA-1 190 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 150 bp overlap
ChIP placenta ENCFF029PHY 331 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 259 bp overlap
ChIP psoas muscle ENCFF305ZVF 333 bp overlap
ChIP spleen ENCFF604DQF 211 bp overlap
ChIP spleen ENCFF678RAG 211 bp overlap
ChIP tibial artery ENCFF279CMY 393 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 301 bp overlap
CTCFL 2 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 105 bp overlap
ChIP K562 ENCFF883NXC 171 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 63 bp overlap
ChIP BLaER1 ENCFF274GAT 151 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 252 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
ELF1 12 datasets
ChIP A-549 GSE122203.ELF1.A-549 146 bp overlap
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 171 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF838BCU 213 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 194 bp overlap
ChIP K562 ENCFF457KVR 351 bp overlap
ChIP K562 ENCFF496AKI 110 bp overlap
ChIP MCF-7 ENCFF305BNP 263 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 149 bp overlap
ChIP SK-N-SH ENCFF871YHY 261 bp overlap
ChIP SK-N-SH ENCSR000BTA.ELF1.SK-N-SH 141 bp overlap
ELF4 1 dataset
ChIP K-562 ENCSR638QHV.ELF4.K-562 80 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 231 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 393 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 233 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 250 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 236 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 247 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 250 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 240 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 230 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 233 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 239 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 228 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 232 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 317 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 339 bp overlap
GABPA 3 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 166 bp overlap
ChIP SK-N-SH ENCFF755TJJ 271 bp overlap
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 113 bp overlap
GABPB1 3 datasets
ChIP HepG2 ENCFF315AWN 393 bp overlap
ChIP K-562 ENCSR138YYY.GABPB1.K-562 157 bp overlap
ChIP K562 ENCFF015GDS 191 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 120 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 191 bp overlap
JUN 4 datasets
ChIP 786-O GSE86092.JUN.786-O 78 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 157 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 231 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 226 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 347 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 190 bp overlap
KMT2A 2 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 202 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 96 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 277 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 212 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 393 bp overlap
RAD21 50 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 207 bp overlap
ChIP A549 ENCFF047SFC 154 bp overlap
ChIP A549 ENCFF264AHX 234 bp overlap
ChIP A549 ENCFF777QNW 225 bp overlap
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP H1 ENCFF698EWO 202 bp overlap
ChIP H1 ENCFF967OJF 173 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 332 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 281 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 274 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 251 bp overlap
ChIP HCT116 ENCFF568PEO 176 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 367 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 195 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 209 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 217 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 235 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 176 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP HepG2 ENCFF963UBJ 233 bp overlap
ChIP IMR-90 ENCFF752PTH 237 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 190 bp overlap
ChIP Ishikawa ENCFF570JVV 225 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 214 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 138 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 141 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 293 bp overlap
ChIP MCF-7 ENCFF694KOM 113 bp overlap
ChIP MCF-7 ENCFF724VCQ 138 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 274 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 225 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 225 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 197 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 218 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 195 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 124 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 267 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 226 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 235 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 150 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 251 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 173 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 213 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 222 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 199 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 222 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 241 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 141 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 210 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 232 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 157 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 177 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 90 bp overlap
SMARCB1 1 dataset
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 118 bp overlap
SMC1 4 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 313 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 265 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 289 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 181 bp overlap
SMC1A 6 datasets
ChIP A-549 GSE76893.SMC1A.A-549 243 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 188 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 220 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 149 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 276 bp overlap
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 197 bp overlap
SMC3 14 datasets
ChIP A549 ENCFF079FKB 371 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 367 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 367 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 367 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 131 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 146 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 210 bp overlap
ChIP HeLa-S3 ENCFF992MML 250 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 180 bp overlap
ChIP HeLa_ESCO2-deltaPBMA_ESCO1_siRNA GSE105004.SMC3.HeLa_ESCO2-deltaPBMA_ESCO1_siRNA 275 bp overlap
ChIP HeLa_ESCO2-deltaPBMA_ctrl_siRNA GSE105004.SMC3.HeLa_ESCO2-deltaPBMA_ctrl_siRNA 180 bp overlap
ChIP IMR-90 ENCFF627LON 218 bp overlap
ChIP SK-N-SH ENCFF791WFB 223 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 188 bp overlap
STAG1 8 datasets
ChIP HCAEC GSE101921.STAG1.HCAEC 194 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 359 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 359 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 143 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF843EBZ 261 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 229 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 197 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 182 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 283 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 77 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 287 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 283 bp overlap
ZBED5 1 dataset
ChIP HepG2 ENCFF991QZL 216 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 103 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 142 bp overlap
ZBTB33 2 datasets
ChIP K562 ENCFF875HLX 339 bp overlap
ChIP K562 ENCFF875HLX 314 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 220 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 151 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 143 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 84 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Huangfu Lab · Publications · Resources · Contact