chr5 : 31,415,425 31,415,768
343 bp 47 TFs 0 linked genes
This 343 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:31,410,425 – 31,420,768
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 134 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 205 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 206 bp overlap
CDK2 1 dataset
ChIP T-47D_PROGESTIN_5M GSE53855.CDK2.T-47D_PROGESTIN_5M 184 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 126 bp overlap
CTCF 3 datasets
ChIP PC-9 ENCFF539ULB 73 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 126 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 134 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 249 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 179 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 216 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 153 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 128 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 128 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 275 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 228 bp overlap
ChIP DE DE-FOXA2-1 343 bp overlap
ChIP DE DE-FOXA2-2 343 bp overlap
GATA2 9 datasets
ChIP ESF GSE108408.GATA2.ESF 215 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 174 bp overlap
ChIP SH-SY5Y ENCFF485YIB 270 bp overlap
ChIP SH-SY5Y ENCFF485YIB 267 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 343 bp overlap
ChIP SK-N-SH ENCFF764OZD 261 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 238 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 250 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 227 bp overlap
GATA3 13 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 185 bp overlap
ChIP MCF-7 ENCFF352QVM 127 bp overlap
ChIP MCF-7 ENCFF352QVM 327 bp overlap
ChIP MCF-7 ENCFF437NQS 303 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 205 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 244 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 132 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 125 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 125 bp overlap
ChIP NGP GSE65664.GATA3.NGP 103 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 208 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 161 bp overlap
ChIP SK-N-SH ENCFF040SSB 191 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 273 bp overlap
ChIP DE DE-GATA4-1 343 bp overlap
ChIP DE DE-GATA4-2 343 bp overlap
ChIP G296S GSE85628.GATA4.G296S 151 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 151 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 343 bp overlap
ChIP foregut GSE117136.GATA4.foregut 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 321 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 343 bp overlap
ChIP DE DE-GATA6-2 343 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 343 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 343 bp overlap
ChIP foregut GSE117136.GATA6.foregut 258 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 171 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 122 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 343 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 236 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 192 bp overlap
ChIP SK-N-SH ENCFF285GEQ 182 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 142 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 177 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 304 bp overlap
KLF3 1 dataset
ChIP HEK293 GSE69739.KLF3.HEK293 285 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 191 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 179 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 300 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 248 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 87 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 240 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 235 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 220 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 343 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 209 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 228 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 343 bp overlap
SMARCA4 4 datasets
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 158 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 271 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 343 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 202 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCB1.TTC-1240_SMARCB1-FL 177 bp overlap
SMARCC1 1 dataset
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 208 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 56 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 245 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 239 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 154 bp overlap
TOX 1 dataset
ChIP SK-N-SH ENCFF977TQV 239 bp overlap
TWIST1 4 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 64 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 72 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 72 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 64 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 343 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 198 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 343 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 311 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 237 bp overlap