chr4 : 183,104,959 183,105,877
918 bp 66 TFs 2 linked genes
This 918 bp open chromatin element is linked to WWC2 and WWC2-AS2 and is bound by 66 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
WWC2 5.7 kb Proximal Proximity
WWC2-AS2 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:183,099,959 – 183,110,877
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 350 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 177 bp overlap
Ahr::Arnt 3 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
BARX1 1 dataset
Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 166 bp overlap
BSX 1 dataset
Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 160 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 141 bp overlap
DLX1 1 dataset
Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 177 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 191 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 669 bp overlap
ChIP DE DE-FOXA2-2 629 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXD3 1 dataset
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 357 bp overlap
ChIP DE DE-GATA4-2 586 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 468 bp overlap
ChIP DE DE-GATA6-2 627 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 331 bp overlap
GBX2 1 dataset
Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 330 bp overlap
HESX1 1 dataset
Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap
HOXC13 1 dataset
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
IKZF2 1 dataset
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 291 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 219 bp overlap
LBX2 1 dataset
Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 217 bp overlap
MEF2A 1 dataset
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
MSX1 1 dataset
Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 407 bp overlap
Msx3 1 dataset
Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 528 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 302 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 219 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 227 bp overlap
ChIP hESC GSE18292.NANOG.hESC 131 bp overlap
Nobox 1 dataset
Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 204 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 491 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 467 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 553 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 132 bp overlap
RAX 1 dataset
Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 193 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 115 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 291 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 415 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 358 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 358 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 317 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 549 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 460 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 248 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 194 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 350 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 727 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 207 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 235 bp overlap
SPIC 1 dataset
Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 284 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 322 bp overlap
TCF4 3 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif DE_36h DE_36h-TCF4_MA0830.3 8 bp overlap
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 168 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 215 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 244 bp overlap
ZEB1 3 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
ZIM3 3 datasets
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
Motif DE_36h DE_36h-ZIM3_MA1709.2 11 bp overlap
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap