chr4 : 178,415,598 178,416,296
698 bp 41 TFs 0 linked genes
This 698 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:178,410,598 – 178,421,296
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 494 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 121 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 178 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 291 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 150 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 276 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 395 bp overlap
ARID1A 1 dataset
ChIP RMG-I GSE104545.ARID1A.RMG-I 273 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 355 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 456 bp overlap
BRD4 3 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 294 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 255 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 441 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 263 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 66 bp overlap
CREB1 3 datasets
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 167 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 698 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 698 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 184 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 274 bp overlap
ChIP BLaER1 ENCFF364PUR 334 bp overlap
ELF1 1 dataset
ChIP SK-N-SH ENCSR000BTA.ELF1.SK-N-SH 115 bp overlap
ERG 1 dataset
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 240 bp overlap
ESR1 4 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 275 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 396 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 367 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 296 bp overlap
FOXA1 2 datasets
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 137 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 465 bp overlap
GABPA 1 dataset
ChIP K-562 ENCSR290MUH.GABPA.K-562 258 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 268 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 441 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 298 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 698 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
MYCN 1 dataset
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 165 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 411 bp overlap
NRF1 2 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 255 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 109 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 337 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 227 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 214 bp overlap
RELA 4 datasets
ChIP KB GSE52469.RELA.KB 204 bp overlap
ChIP KB_5Z GSE64223.RELA.KB_5Z 165 bp overlap
ChIP KB_5Z_IL GSE64223.RELA.KB_5Z_IL 155 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 240 bp overlap
REST 4 datasets
ChIP GM23338 ENCSR871KYB.REST.GM23338 150 bp overlap
ChIP H1 ENCFF429RUE 245 bp overlap
ChIP SK-N-SH ENCFF635KBN 107 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 175 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 302 bp overlap
RUVBL2 1 dataset
ChIP Huh-7 GSE97411.RUVBL2.Huh-7 562 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 162 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 208 bp overlap
ChIP DKO GSE131606.SMC1.DKO 193 bp overlap
SPI1 1 dataset
ChIP K-562 GSE70482.SPI1.K-562 363 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 264 bp overlap
SUZ12 1 dataset
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 210 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 412 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 428 bp overlap
TRIM28 2 datasets
ChIP hESC GSE115387.TRIM28.hESC 211 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 223 bp overlap