chr1 : 85,417,190 85,417,341
151 bp 39 TFs 0 linked genes
This 151 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:85,412,190 – 85,422,341
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 151 bp overlap
BRD4 3 datasets
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 135 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 151 bp overlap
ChIP HUVEC-C_modETS1 GSE93030.BRD4.HUVEC-C_modETS1 131 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 148 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 115 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 88 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 83 bp overlap
CTCF 44 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 151 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 151 bp overlap
ChIP GM23338 ENCFF772DML 86 bp overlap
ChIP H1 ENCFF764RHO 151 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 113 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 82 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 82 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 100 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 150 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 151 bp overlap
ChIP HepG2 ENCFF194VBQ 151 bp overlap
ChIP HepG2 ENCFF757EKU 151 bp overlap
ChIP MCF-7 ENCFF198DQX 151 bp overlap
ChIP MCF-7 ENCFF414SZG 150 bp overlap
ChIP MCF-7 ENCFF424NQR 151 bp overlap
ChIP MCF-7 ENCFF494VXA 151 bp overlap
ChIP MCF-7 ENCFF844STM 151 bp overlap
ChIP MCF-7 ENCFF954TUV 151 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 142 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 127 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 109 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 99 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 151 bp overlap
ChIP Panc1 ENCFF056JQX 151 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 138 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 151 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 139 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 151 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 151 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 151 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 151 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 151 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 151 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 151 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 151 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 151 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 147 bp overlap
ChIP hiPSC_IIA12 GSE106870.CTCF.hiPSC_IIA12 141 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 151 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 107 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 148 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 119 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 138 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 151 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 151 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 151 bp overlap
ESR1 25 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 151 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 151 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 151 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 151 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 151 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 151 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 151 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 151 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 151 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 127 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 151 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 122 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 151 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 151 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 151 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 151 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 151 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 151 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 151 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 151 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 151 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 151 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 151 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 151 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 151 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 151 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 74 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 151 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 151 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 123 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCFF064TDQ 151 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 148 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 115 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 151 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 151 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 151 bp overlap
NR3C1 2 datasets
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 151 bp overlap
ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 107 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 151 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 135 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 151 bp overlap
RAD21 15 datasets
ChIP H1 ENCFF698EWO 151 bp overlap
ChIP HCT116 ENCFF568PEO 151 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 125 bp overlap
ChIP HepG2 ENCFF360ZSW 151 bp overlap
ChIP HepG2 ENCFF906QIS 151 bp overlap
ChIP Ishikawa ENCFF570JVV 151 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 151 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 130 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 151 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 151 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 151 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 139 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 145 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 151 bp overlap
RELA 3 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 97 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 97 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 131 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 150 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 85 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 133 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 109 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 149 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 151 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 151 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 151 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 151 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 99 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 151 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 92 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 151 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 134 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 129 bp overlap
ZNF708 1 dataset
ChIP HEK293T GSE78099.ZNF708.HEK293T 151 bp overlap