chr4 : 163,331,029 163,331,306
277 bp 36 TFs 1 linked gene
This 277 bp open chromatin element is linked to NPY1R and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NPY1R 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:163,326,029 – 163,336,306
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 142 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 190 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 119 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 191 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 154 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF956TPS 132 bp overlap
ChIP MCF-7 ENCFF155HZI 102 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 55 bp overlap
Cebpa 12 datasets
ChIP BLaER1 ENCFF093OYK 77 bp overlap
ChIP BLaER1 ENCFF140EYR 100 bp overlap
ChIP BLaER1 ENCFF250ODG 67 bp overlap
ChIP BLaER1 ENCFF262VBH 206 bp overlap
ChIP BLaER1 ENCFF274GAT 103 bp overlap
ChIP BLaER1 ENCFF335XTP 210 bp overlap
ChIP BLaER1 ENCFF346MCV 120 bp overlap
ChIP BLaER1 ENCFF364PUR 67 bp overlap
ChIP BLaER1 ENCFF460KDD 265 bp overlap
ChIP BLaER1 ENCFF798NMV 56 bp overlap
ChIP BLaER1 ENCFF858JKM 83 bp overlap
ChIP BLaER1 ENCFF896HSY 116 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 164 bp overlap
EZH2 9 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 277 bp overlap
ChIP T98G GSE112240.EZH2.T98G 233 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 77 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 275 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 187 bp overlap
ChIP fibroblast of lung ENCFF479BAW 130 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 264 bp overlap
ChIP keratinocyte ENCFF070STK 277 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 109 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 129 bp overlap
FOXA1 3 datasets
ChIP MCF-7 GSE72249.FOXA1.MCF-7 161 bp overlap
ChIP MCF-7_JC4694 GSE126004.FOXA1.MCF-7_JC4694 54 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 132 bp overlap
GRHL2 2 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 161 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 208 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 223 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 277 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 178 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 244 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 148 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 65 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 162 bp overlap
MLLT1 1 dataset
ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 137 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF542NWJ 237 bp overlap
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 142 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 94 bp overlap
NR3C1 1 dataset
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 119 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 197 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 277 bp overlap
RNF2 2 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 100 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 74 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF437VFY 277 bp overlap
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 267 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 94 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 118 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 162 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 62 bp overlap
ZNF616 1 dataset
ChIP HEK293T GSE78099.ZNF616.HEK293T 242 bp overlap