chr4 : 158,459,448 – 158,460,044

596 bp 57 TFs 0 linked genes

This 596 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

AR 1 dataset

ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap

ARID1A 1 dataset

ChIP RMG-I GSE120058.ARID1A.RMG-I 75 bp overlap

BACH1 1 dataset

ChIP K562 ENCFF419VIM 239 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 4 datasets

ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 93 bp overlap

ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 93 bp overlap

ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 412 bp overlap

ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 90 bp overlap

CTCF 12 datasets

Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap

ChIP GM23338 ENCFF772DML 201 bp overlap

ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 344 bp overlap

ChIP MCF-7 ENCFF844STM 191 bp overlap

ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 185 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap

ChIP erythroid GSE67783.CTCF.erythroid 226 bp overlap

ChIP keratinocyte ENCFF046PBT 185 bp overlap

ChIP keratinocyte ENCFF291YDC 185 bp overlap

ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 117 bp overlap

ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 181 bp overlap

ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 438 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 253 bp overlap

EZH2 1 dataset

ChIP T98G GSE112240.EZH2.T98G 207 bp overlap

FERD3L 1 dataset

Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap

Hic1 1 dataset

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

MAFG 1 dataset

ChIP K-562 ENCSR818DQV.MAFG.K-562 66 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

MED1 1 dataset

ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 52 bp overlap

MITF 1 dataset

Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NFIA 1 dataset

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIC 1 dataset

Motif ES_0h ES_0h-NFIC_MA0161.3 7 bp overlap

NFIX 1 dataset

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

ChIP K-562 ENCSR970NKQ.NR2F1.K-562 73 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PPARG 1 dataset

Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap

RAD21 1 dataset

ChIP H1 ENCFF698EWO 241 bp overlap

RFX4 1 dataset

Motif ES_0h ES_0h-RFX4_MA0799.3 13 bp overlap

RREB1 1 dataset

Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap

SIX2 1 dataset

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

SMARCA4 1 dataset

ChIP K562 ENCFF506JCB 89 bp overlap

SP1 1 dataset

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPIB 1 dataset

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

Stat4 1 dataset

Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap

TAL1::TCF3 1 dataset

Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap

TFAP4 1 dataset

Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap

TFE3 1 dataset

Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap

TFEB 1 dataset

Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap

TFEC 1 dataset

Motif DE_12h DE_12h-TFEC_MA0871.3 8 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

USF1 3 datasets

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 154 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZKSCAN3 1 dataset

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF148 1 dataset

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF324 1 dataset

Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap