chr4 : 139,551,444 139,551,655
211 bp 47 TFs 2 linked genes
This 211 bp open chromatin element is linked to SETD7 and ENSG00000272717 and is bound by 47 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SETD7 4.6 kb Proximal Proximity
ENSG00000272717 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:139,546,444 – 139,556,655
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 102 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 104 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 136 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 153 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 207 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF433UFM 147 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 53 bp overlap
ESR1 1 dataset
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 159 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 162 bp overlap
GATA1 5 datasets
ChIP K-562 GSE107726.GATA1.K-562 211 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 171 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 154 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 205 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 139 bp overlap
GATA2 2 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 167 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 211 bp overlap
GATA3 1 dataset
ChIP BE2C GSE65664.GATA3.BE2C 192 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 110 bp overlap
ChIP DE DE-GATA4-2 211 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 58 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 211 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 211 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 211 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 211 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 211 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 211 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 128 bp overlap
GFI1B 2 datasets
ChIP HEK293 ENCFF264FBS 211 bp overlap
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 151 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 211 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 97 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 211 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 158 bp overlap
ChIP K562 ENCFF317JJX 115 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 156 bp overlap
ChIP K562 ENCFF348IBL 90 bp overlap
KMT2A 6 datasets
ChIP HEK293T_C-term_C104 GSE90762.KMT2A.HEK293T_C-term_C104 211 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 211 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 211 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 98 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 211 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 126 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 211 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 145 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 111 bp overlap
NEUROD1 4 datasets
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 211 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 211 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 211 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 211 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 148 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 211 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 211 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 211 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 211 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 211 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 211 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 211 bp overlap
ChIP HEK293 ENCFF283AJL 129 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 211 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 159 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 200 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 200 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 69 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 92 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 83 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 124 bp overlap
ChIP HEK293 ENCFF865LIO 211 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 211 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 116 bp overlap
ChIP HEK293T GSE78099.ZNF18.HEK293T 64 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 73 bp overlap
ZNF337 1 dataset
ChIP HEK293T GSE78099.ZNF337.HEK293T 211 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 76 bp overlap