chr4 : 112,309,243 112,309,678
435 bp 55 TFs 0 linked genes
This 435 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:112,304,243 – 112,314,678
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 326 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 128 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 94 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 189 bp overlap
BRD4 3 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 192 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 200 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 249 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 301 bp overlap
CTCF 19 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_48h DE_48h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM06990 ENCFF471OQT 255 bp overlap
ChIP GM23338 ENCFF772DML 183 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 238 bp overlap
ChIP H9 ENCFF152GTF 135 bp overlap
ChIP HEK293 ENCFF821TIC 296 bp overlap
ChIP HEK293 ENCFF821TIC 370 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 359 bp overlap
ChIP brain ENCFF163BBN 338 bp overlap
ChIP brain ENCFF163BBN 435 bp overlap
ChIP brain ENCFF685VRG 387 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 251 bp overlap
ChIP endodermal cell ENCFF471YCZ 167 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 233 bp overlap
ChIP neural progenitor cell ENCFF420RBO 186 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 226 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 124 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXP1 2 datasets
ChIP WTC11 ENCFF338WGC 384 bp overlap
ChIP WTC11 ENCFF338WGC 376 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 231 bp overlap
HIC2 3 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_48h DE_48h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 100 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 193 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 97 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 106 bp overlap
ChIP K562 ENCFF167YID 240 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 435 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP H1 ENCFF967OJF 202 bp overlap
REST 5 datasets
ChIP HEK293 ENCFF073DOT 165 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 184 bp overlap
ChIP Ishikawa ENCFF456OHV 237 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 78 bp overlap
ChIP PFSK-1 ENCFF845VHA 197 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 352 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 279 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
THAP1 3 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
YY1 4 datasets
ChIP HEK293 ENCFF734SBY 391 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 237 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 235 bp overlap
ChIP Ishikawa ENCFF505XQX 341 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 435 bp overlap
ZBTB6 3 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 318 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCFF942LFP 372 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 277 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF281 4 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 241 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 208 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 169 bp overlap
ZNF766 2 datasets
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ChIP K562 ENCFF348LDO 371 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCFF468FCG 195 bp overlap
Zfp335 3 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap