chr4 : 102,492,717 102,493,103
386 bp 33 TFs 2 linked genes
This 386 bp open chromatin element is linked to ENSG00000260651 and NFKB1 and is bound by 33 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000260651 8.2 kb Proximal Proximity
NFKB1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,487,717 – 102,498,103
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 98 bp overlap
BRD2 5 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 226 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 226 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 308 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 308 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 223 bp overlap
BRD4 4 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 90 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 90 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 357 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 357 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 215 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 302 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 241 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 92 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 324 bp overlap
ChIP DE DE-GATA4-2 163 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 140 bp overlap
GATA6 4 datasets
ChIP AGS GSE51705.GATA6.AGS 132 bp overlap
ChIP DE DE-GATA6-1 63 bp overlap
ChIP DE DE-GATA6-2 158 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 116 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 98 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 131 bp overlap
JUN 1 dataset
ChIP keratinocyte_CHD4-KD GSE139685.JUN.keratinocyte_CHD4-KD 90 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 129 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 77 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 198 bp overlap
MYB 1 dataset
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 264 bp overlap
MYC 3 datasets
ChIP P493-6 GSE77061.MYC.P493-6 118 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MYC.P493-6_CMYC_1H 159 bp overlap
ChIP U2OS_Doxy GSE77328.MYC.U2OS_Doxy 101 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 173 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 197 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 151 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 145 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 138 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 155 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 261 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 189 bp overlap
ChIP K562 ENCFF690CFF 255 bp overlap
SPI1 31 datasets
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 90 bp overlap
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 145 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 297 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 108 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 108 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 187 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 105 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 154 bp overlap
ChIP GM12878 ENCFF134LCP 156 bp overlap
ChIP GM12891 ENCFF563IUT 148 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 122 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 200 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 123 bp overlap
ChIP K-562 GSE74999.SPI1.K-562 104 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 108 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 103 bp overlap
ChIP K562 ENCFF410ORC 69 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 125 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 174 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 174 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 105 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 151 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 121 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 121 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 134 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 188 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 113 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 125 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 78 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 113 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 116 bp overlap
TEAD1 2 datasets
ChIP K-562 ENCSR591ASD.TEAD1.K-562 90 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 386 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 168 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 371 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 79 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 135 bp overlap