chr4 : 62,319,229 62,319,791
562 bp 46 TFs 0 linked genes
This 562 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:62,314,229 – 62,324,791
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 231 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 431 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 157 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 132 bp overlap
FOXA1 1 dataset
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 238 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 420 bp overlap
ChIP DE DE-GATA4-2 420 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 401 bp overlap
ChIP DE DE-GATA6-2 430 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 506 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 346 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NFIB 1 dataset
Motif DE_60h DE_60h-NFIB_MA1643.2 17 bp overlap
NFIC 1 dataset
Motif DE_60h DE_60h-NFIC_MA1527.2 15 bp overlap
NFIX 1 dataset
Motif DE_60h DE_60h-NFIX_MA1528.2 14 bp overlap
NFYB 1 dataset
Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap
NRL 1 dataset
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Nr2e3 1 dataset
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 279 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 211 bp overlap
SPIB 1 dataset
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 175 bp overlap
TCF7L1 1 dataset
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
TEAD1 1 dataset
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZNF317 1 dataset
Motif DE_60h DE_60h-ZNF317_MA1593.2 8 bp overlap
ZNF382 1 dataset
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
ZNF549 1 dataset
Motif DE_60h DE_60h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap